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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA792582" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 29 ✖

bioproject 1

  • PRJNA792582 · 29 ✖

analysis 1

  • diamond · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7155519 7155519 PRJNA792582_P_NODE_5086_length_730_cov_1.406393_g4362_i0 PRJNA792582 5086 730 1.406393 10.2666689 Tanacetum cinerariifolium 118510 Plants Plants 236 3.19e-67   NR GEU28517.1 118510 g4362 i0 62.4 0.776712328767123 189 38 77.7 1 5 571 422 577 GEU28517.1 preprotein translocase subunit SCY1, chloroplastic [Tanacetum cinerariifolium] diamond 567 236 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
13530455 13530455 PRJNA792582_P_NODE_20471_length_380_cov_2.387622_g19657_i0 PRJNA792582 20471 380 2.387622 9.0729636 root 1 Root_unresolved Root_unresolved 126 1.0500000000000001e-30   NR GEU28483.1 118510 g19657 i0 76.2 10.6105263157895 84 20 66.3 0 127 378 1140 1223 GEU28483.1 chaperonin CPN60-2, mitochondrial [Tanacetum cinerariifolium] diamond 4032 126 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
18628772 18628772 PRJNA792582_P_NODE_56935_length_244_cov_0.900585_g56121_i0 PRJNA792582 56935 244 0.900585 2.1974274 Eukaryota 2759 Plants Plants 119 3.04e-29   NR KAK4557423.1 3512 g56121 i0 81.8 23.5081967213115 66 12 81.1 0 47 244 1 66 KAK4557423.1 hypothetical protein RGQ29_007255 [Quercus rubra] diamond 5736 120 0.991666666666667 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra
26610387 26610387 PRJNA792582_P_NODE_19841_length_386_cov_2.146965_g19027_i0 PRJNA792582 19841 386 2.146965 8.2872849 Lactuca sativa 4236 Plants Plants 87.8 2e-17   NR XP_023751240.1 4236 g19027 i0 39.8 1.03367875647668 133 74 98.7 3 383 3 3 135 XP_023751240.1 WD-40 repeat-containing protein MSI3 [Lactuca sativa] diamond 399 87.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Lactuca Lactuca sativa
26768892 26768892 PRJNA792582_P_NODE_30601_length_312_cov_0.832636_g29787_i0 PRJNA792582 30601 312 0.832636 2.59782432 Gossypium turneri 34284 Plants Plants 43.5 0.0349   NR MFQ6658037.1 34284 g29787 i0 35.7 0.403846153846154 42 27 40.4 0 19 144 60 101 MFQ6658037.1 hypothetical protein [Gossypium turneri] diamond 126 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Gossypium Gossypium turneri
27157416 27157416 PRJNA792582_P_NODE_33882_length_296_cov_1.376682_g33068_i0 PRJNA792582 33882 296 1.376682 4.07497872 Magnoliopsida 3398 Plants Plants 48.1 8.81e-4   NR KAI3709967.1 13427 g33068 i0 42.9 1.27702702702703 63 31 63.9 1 265 77 519 576 KAI3709967.1 hypothetical protein L2E82_39738 [Cichorium intybus] diamond 378 48.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Cichorium Cichorium intybus
27179943 27179943 PRJNA792582_P_NODE_49782_length_251_cov_0.865169_g48968_i0 PRJNA792582 49782 251 0.865169 2.17157419 Linum trigynum 586398 Plants Plants 45.4 0.00443   NR CAL1406803.1 586398 g48968 i0 23.8 5.68924302788845 101 57 96.8 1 1 243 211 311 CAL1406803.1 unnamed protein product [Linum trigynum] diamond 1428 45.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Linaceae Linum Linum trigynum
27275075 27275075 PRJNA792582_P_NODE_52103_length_249_cov_0.875000_g51289_i0 PRJNA792582 52103 249 0.875 2.17875 Miscanthus floridulus 154761 Plants Plants 43.9 0.00778   NR XP_066334265.1 154761 g51289 i0 44.1 0.819277108433735 68 31 81.9 1 205 2 83 143 XP_066334265.1 uncharacterized protein [Miscanthus floridulus] diamond 204 43.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Miscanthus Miscanthus floridulus
28159434 28159434 PRJNA792582_P_NODE_22705_length_362_cov_0.972318_g21891_i0 PRJNA792582 22705 362 0.972318 3.51979116 Triticum aestivum 4565 Plants Plants 56.2 2.48e-6   NR XP_044415394.1 4565 g21891 i0 44.4 0.522099447513812 63 35 52.2 0 1 189 128 190 XP_044415394.1 LRR receptor-like serine/threonine-protein kinase EFR [Triticum aestivum] diamond 189 56.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
28642154 28642154 PRJNA792582_P_NODE_30767_length_311_cov_1.033613_g29953_i0 PRJNA792582 30767 311 1.033613 3.21453643 Eukaryota 2759 Plants Plants 85.9 1.24e-18   NR KAK4336940.1 243964 g29953 i0 59.5 2.62379421221865 74 30 71.4 0 311 90 1 74 KAK4336940.1 hypothetical protein RND71_043512 [Anisodus tanguticus] diamond 816 86.7 0.990772779700115 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Anisodus Anisodus tanguticus
28673633 28673633 PRJNA792582_P_NODE_42327_length_271_cov_3.186869_g41513_i0 PRJNA792582 42327 271 3.186869 8.63641499 Magnoliopsida 3398 Plants Plants 56.6 6.05e-7   NR KAI3672245.1 13427 g41513 i0 61.7 2.98892988929889 47 18 52 0 205 65 132 178 KAI3672245.1 hypothetical protein L2E82_52919 [Cichorium intybus] diamond 810 56.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Cichorium Cichorium intybus
29178910 29178910 PRJNA792582_P_NODE_24629_length_348_cov_1.269091_g23815_i0 PRJNA792582 24629 348 1.269091 4.41643668 Streptophyta 35493 Plants Plants 68.9 3.44e-11   NR EFJ27613.1 88036 g23815 i0 35.4 9.80172413793103 113 60 97.4 4 2 340 22 121 EFJ27613.1 LIP1, ras family GTPase [Selaginella moellendorffii] diamond 3411 69.3 0.994227994227994 Eukaryota Embryophyta Viridiplantae Streptophyta Lycopodiopsida Selaginellales Selaginellaceae Selaginella Selaginella moellendorffii
29178917 29178917 PRJNA792582_P_NODE_54509_length_246_cov_0.890173_g53695_i0 PRJNA792582 54509 246 0.890173 2.18982558 Eukaryota 2759 Plants Plants 55.8 9.11e-7   NR XP_059597963.1 29760 g53695 i0 43.1 6.07317073170732 58 32 69.5 1 54 224 90 147 XP_059597963.1 probable leucine-rich repeat receptor-like protein kinase At1g35710 [Vitis vinifera] diamond 1494 55.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Vitales Vitaceae Vitis Vitis vinifera
29232861 29232861 PRJNA792582_P_NODE_12889_length_476_cov_0.863524_g12077_i0 PRJNA792582 12889 476 0.863524 4.11037424 Amborella trichopoda 13333 Plants Plants 75.9 9.82e-13   NR XP_011624406.1 13333 g12077 i0 44.2 3.47268907563025 86 48 54.2 0 452 195 284 369 XP_011624406.1 BTB/POZ and MATH domain-containing protein 4 [Amborella trichopoda] diamond 1653 75.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Amborellales Amborellaceae Amborella Amborella trichopoda
29304960 29304960 PRJNA792582_P_NODE_36349_length_287_cov_1.971963_g35535_i0 PRJNA792582 36349 287 1.971963 5.65953381 Ananas 4614 Plants Plants 93.6 8.33e-20   NR XP_020086597.1 4615 g35535 i0 49.4 2.64459930313589 85 38 88.9 1 283 29 343 422 XP_020086597.1 beta-hexosaminidase 1 [Ananas comosus] diamond 759 93.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Bromeliaceae Ananas Ananas comosus
29737662 29737662 PRJNA792582_P_NODE_56190_length_244_cov_1.725146_g55376_i0 PRJNA792582 56190 244 1.725146 4.20935624 Trifolium medium 97028 Plants Plants 43.1 0.0134   NR MCI12986.1 97028 g55376 i0 42.1 0.700819672131147 57 31 68.9 2 11 178 81 136 MCI12986.1 lysine-specific demethylase 5B [Trifolium medium] diamond 171 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Trifolium Trifolium medium
30622342 30622342 PRJNA792582_P_NODE_37333_length_285_cov_1.165094_g36519_i0 PRJNA792582 37333 285 1.165094 3.3205179 Triticum aestivum 4565 Plants Plants 43.1 0.0386   NR XBH82435.1 4565 g36519 i0 49.2 0.621052631578947 59 25 56.8 2 2 163 142 200 XBH82435.1 hypothetical protein VPH35_071092 [Triticum aestivum] diamond 177 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
30622345 30622345 PRJNA792582_P_NODE_41253_length_274_cov_1.975124_g40439_i0 PRJNA792582 41253 274 1.975124 5.41183976 Populus tomentosa 118781 Plants Plants 43.5 0.0235   NR KAG6749690.1 118781 g40439 i0 37.5 0.613138686131387 56 34 61.3 1 106 273 37 91 KAG6749690.1 hypothetical protein POTOM_046757 [Populus tomentosa] diamond 168 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Populus Populus tomentosa
30821262 30821262 PRJNA792582_P_NODE_41054_length_275_cov_1.247525_g40240_i0 PRJNA792582 41054 275 1.247525 3.43069375 Eukaryota 2759 Plants Plants 92 1.95e-19   NR CAH1426817.1 75947 g40240 i0 46.2 9.85090909090909 91 49 99.3 0 1 273 72 162 CAH1426817.1 unnamed protein product [Lactuca virosa] diamond 2709 92.8 0.991379310344828 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Lactuca Lactuca virosa
30938598 30938598 PRJNA792582_P_NODE_44714_length_265_cov_1.416667_g43900_i0 PRJNA792582 44714 265 1.416667 3.75416755 Kingdonia uniflora 39325 Plants Plants 76.6 1.34e-14   NR KAF6163148.1 39325 g43900 i0 79.2 1.10943396226415 48 10 54.3 0 265 122 196 243 KAF6163148.1 hypothetical protein GIB67_025012 [Kingdonia uniflora] diamond 294 76.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Circaeasteraceae Kingdonia Kingdonia uniflora
31643041 31643041 PRJNA792582_P_NODE_53796_length_247_cov_0.885057_g52982_i0 PRJNA792582 53796 247 0.885057 2.18609079 root 1 Root_unresolved Root_unresolved 119 7.009999999999999e-31   NR CAM6053906.1 128247 g52982 i0 63.8 1.94331983805668 80 29 97.2 0 2 241 6 85 CAM6053906.1 unnamed protein product [Sphagnum tenellum] diamond 480 119 1 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum tenellum
31665530 31665530 PRJNA792582_P_NODE_14897_length_445_cov_3.161290_g14084_i0 PRJNA792582 14897 445 3.16129 14.0677405 Cucumis melo 3656 Plants Plants 53.5 5.1e-5   NR XP_008464825.1 3656 g14084 i0 39 3.28988764044944 100 49 60 3 174 440 28 126 XP_008464825.1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A [Cucumis melo] diamond 1464 53.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis melo
31697258 31697258 PRJNA792582_P_NODE_24597_length_348_cov_1.658182_g23783_i0 PRJNA792582 24597 348 1.658182 5.77047336 Cryptomeria japonica 3369 Plants Plants 54.7 7.76e-6   NR XP_059073962.1 3369 g23783 i0 43.9 0.491379310344828 57 32 49.1 0 3 173 214 270 XP_059073962.1 receptor-like protein 35 [Cryptomeria japonica] diamond 171 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
32045343 32045343 PRJNA792582_P_NODE_54958_length_246_cov_0.890173_g54144_i0 PRJNA792582 54958 246 0.890173 2.18982558 Glycine soja 3848 Plants Plants 43.1 0.0233   NR KHN04400.1 3848 g54144 i0 29.3 0.914634146341463 75 44 80.5 1 22 219 41 115 KHN04400.1 Hexokinase-2, chloroplastic [Glycine soja] diamond 225 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Glycine Glycine soja
32086076 32086076 PRJNA792582_P_NODE_55458_length_245_cov_0.895349_g54644_i0 PRJNA792582 55458 245 0.895349 2.19360505 Brassica 3705 Plants Plants 44.7 0.00792   NR CDY27513.1 3708 g54644 i0 35.2 1.98367346938776 54 35 66.1 0 222 61 263 316 CDY27513.1 BnaC04g51540D [Brassica napus] diamond 486 44.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica napus
32298762 32298762 PRJNA792582_P_NODE_51719_length_249_cov_0.875000_g50905_i0 PRJNA792582 51719 249 0.875 2.17875 Trifolium repens 3899 Plants Plants 41.6 0.0283   NR WJX15399.1 3899 g50905 i0 40.4 0.626506024096386 52 28 59 2 101 247 42 93 WJX15399.1 hypothetical protein P8452_05546 [Trifolium repens] diamond 156 41.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Trifolium Trifolium repens
32456767 32456767 PRJNA792582_P_NODE_29119_length_320_cov_1.246964_g28305_i0 PRJNA792582 29119 320 1.246964 3.9902848 Mikania micrantha 192012 Plants Plants 59.3 8.3e-8   NR KAD5316810.1 192012 g28305 i0 42.5 0.75 80 32 61.9 2 237 40 119 198 KAD5316810.1 hypothetical protein E3N88_16756 [Mikania micrantha] diamond 240 59.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Mikania Mikania micrantha
32560962 32560962 PRJNA792582_P_NODE_55499_length_245_cov_0.895349_g54685_i0 PRJNA792582 55499 245 0.895349 2.19360505 Escallonia 23075 Plants Plants 63.9 1.31e-9   NR KAK2975102.1 112253 g54685 i0 39.2 9.6734693877551 79 41 96.7 2 245 9 268 339 KAK2975102.1 hypothetical protein RJ640_018904, partial [Escallonia rubra] diamond 2370 63.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Escalloniales Escalloniaceae Escallonia Escallonia rubra
32623613 32623613 PRJNA792582_P_NODE_5920_length_681_cov_1.995066_g5161_i0 PRJNA792582 5920 681 1.995066 13.58639946 Eukaryota 2759 Plants Plants 47.4 0.0123   NR CAL9222530.1 81970 g5161 i0 24.7 2.42290748898678 154 103 63.9 3 545 111 7 156 CAL9222530.1 unnamed protein product [Arabidopsis halleri] diamond 1650 47.8 0.99163179916318 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis halleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;