RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA789095" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA789095 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26610337 26610337 PRJNA789095_P_NODE_45481_length_298_cov_2.346667_g44147_i0 PRJNA789095 45481 298 2.346667 6.99306766 brine shrimp arlivirus 8 2900383 Viruses Viruses 104 5.229999999999999e-24   NR UNI74120.1 2900383 g44147 i0 60.5 0.815436241610738 81 32 81.5 0 3 245 279 359 UNI74120.1 MAG: hypothetical protein [brine shrimp arlivirus 8] diamond 243 104 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsaeighalis
31285915 31285915 PRJNA789095_P_NODE_55535_length_273_cov_2.025000_g54201_i0 PRJNA789095 55535 273 2.025 5.52825 Avian associated hepe-like virus 21 3067867 Viruses Viruses 52.4 3.82e-6   NR WPR16533.1 3067867 g54201 i0 33.3 0.989010989010989 90 60 98.9 0 272 3 34 123 WPR16533.1 MAG: RNA-dependent RNA polymerase, partial [Avian associated hepe-like virus 21] diamond 270 52.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales Hepeviridae   Avian associated hepe-like virus 21
32614529 32614529 PRJNA789095_P_NODE_69620_length_247_cov_1.431034_g68286_i0 PRJNA789095 69620 247 1.431034 3.53465398 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 166 1.17e-45   NR WKU61618.1 3063761 g68286 i0 98.8 0.995951417004049 82 1 99.6 0 1 246 146 227 WKU61618.1 polyprotein [Zebrafish picornavirus 2] diamond 246 166 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;