RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA789095" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA789095 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26873392 26873392 PRJNA789095_P_NODE_53841_length_277_cov_1.495098_g52507_i0 PRJNA789095 53841 277 1.495098 4.14142146 Bacteria 2 Bacteria Bacteria 107 1.37e-24   NR OYW86233.1 1970478 g52507 i0 58.9 1.94945848375451 90 33 97.5 1 275 6 423 508 OYW86233.1 MAG: hypothetical protein B7Z17_00825, partial [Candidatus Saccharibacteria bacterium 32-49-10] diamond 540 107 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-49-10
29683587 29683587 PRJNA789095_P_NODE_48630_length_289_cov_1.240741_g47296_i0 PRJNA789095 48630 289 1.240741 3.58574149 Bacteria 2 Bacteria Bacteria 53.5 1.1e-5   NR MFC1727590.1 2052139 g47296 i0 45.8 1.95155709342561 48 26 49.8 0 4 147 1821 1868 MFC1727590.1 kelch repeat-containing protein [Patescibacteria group bacterium] diamond 564 53.9 0.992578849721707 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30306998 30306998 PRJNA789095_P_NODE_52472_length_280_cov_1.487923_g51138_i0 PRJNA789095 52472 280 1.487923 4.1661844 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 105 6.22e-24   NR MEO8691194.1 1917697 g51138 i0 57.3 0.953571428571429 89 38 95.4 0 272 6 409 497 MEO8691194.1 SulP family inorganic anion transporter [Candidatus Saccharimonas sp.] diamond 267 105 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
32771830 32771830 PRJNA789095_P_NODE_67680_length_249_cov_1.357955_g66346_i0 PRJNA789095 67680 249 1.357955 3.38130795 Candidatus Saccharibacteria bacterium 49-2 1895829 Bacteria Bacteria 83.2 2.39e-16   NR OJU87593.1 1895829 g66346 i0 48.2 1 83 43 100 0 249 1 646 728 OJU87593.1 MAG: phenylalanine--tRNA ligase subunit beta [Candidatus Saccharibacteria bacterium 49-20] diamond 249 83.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;