RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA788929" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA788929 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23722520 23722520 PRJNA788929_P_NODE_7139_length_706_cov_38.895735_g6506_i0 PRJNA788929 7139 706 38.895735 274.6038891 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 295 8.749999999999997e-88   NR XCM68117.1 3003959 g6506 i0 76.9 0.773371104815864 182 42 77.3 0 679 134 2704 2885 XCM68117.1 MAG: polyprotein [Picornavirales sp.] diamond 546 295 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
26832247 26832247 PRJNA788929_P_NODE_44821_length_230_cov_4.458599_g44160_i0 PRJNA788929 44821 230 4.458599 10.2547777 Lasius niger virus 1 2018503 Viruses Viruses 92.4 1.04e-19   NR UXD80070.1 2018503 g44160 i0 60.9 1.91739130434783 69 27 90 0 208 2 1696 1764 UXD80070.1 RNA-dependent RNA polymerase [Lasius niger virus 1] diamond 441 92.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Polycipiviridae Sopolycivirus Sopolycivirus gammalasii
29958911 29958911 PRJNA788929_P_NODE_12231_length_496_cov_35.186761_g11574_i0 PRJNA788929 12231 496 35.186761 174.52633456 Penicillium roqueforti ssRNA mycovirus 1 1532180 Viruses Viruses 66.2 3.67e-9   NR YP_009052456.1 1532180 g11574 i0 49.2 0.368951612903226 61 31 36.9 0 190 8 53 113 YP_009052456.1 RNA-dependent RNA polymerase [Penicillium roqueforti ssRNA mycovirus 1] diamond 183 66.2 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Fusariviridae Alphafusarivirus Alphafusarivirus roqueforti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;