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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA788929" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA788929 · 13 ✖

analysis 1

  • diamond · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
769694 769694 PRJNA788929_P_NODE_6921_length_721_cov_122.435185_g6290_i0 PRJNA788929 6921 721 122.435185 882.75768385 Metazoa 33208 Nematoda Nematoda 216 2.44e-67   NR CAJ0602523.1 53992 g6290 i0 61.1 16.1317614424411 162 63 67.4 0 649 164 40 201 CAJ0602523.1 unnamed protein product, partial [Cylicocyclus nassatus] diamond 11631 216 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongylidae Cylicocyclus Cylicocyclus nassatus
26778239 26778239 PRJNA788929_P_NODE_7601_length_677_cov_85.793046_g6960_i0 PRJNA788929 7601 677 85.793046 580.81892142 Rhabditida 6236 Nematoda Nematoda 133 6.970000000000001e-36   NR KHN79676.1 6265 g6960 i0 51.2 4.98966026587888 125 60 55.4 1 582 208 9 132 KHN79676.1 40S ribosomal protein S12 [Toxocara canis] diamond 3378 134 0.992537313432836 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
27306704 27306704 PRJNA788929_P_NODE_8383_length_635_cov_190.258007_g7735_i0 PRJNA788929 8383 635 190.258007 1208.13834445 Dracunculus medinensis 318479 Nematoda Nematoda 122 8.04e-32   NR VDN56922.1 318479 g7735 i0 56.2 1.72913385826772 121 53 57.2 0 558 196 3 123 VDN56922.1 unnamed protein product [Dracunculus medinensis] diamond 1098 122 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Dracunculidae Dracunculus Dracunculus medinensis
27874912 27874912 PRJNA788929_P_NODE_20885_length_357_cov_2.580986_g20225_i0 PRJNA788929 20885 357 2.580986 9.21412002 Caenorhabditis auriculariae 2777116 Nematoda Nematoda 167 2.28e-45   NR CAD6185005.1 2777116 g20225 i0 78.5 1.79831932773109 107 22 89.1 1 24 341 654 760 CAD6185005.1 unnamed protein product [Caenorhabditis auriculariae] diamond 642 167 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis auriculariae
28853570 28853570 PRJNA788929_P_NODE_12788_length_483_cov_1.765854_g12131_i0 PRJNA788929 12788 483 1.765854 8.52907482 Caenorhabditis auriculariae 2777116 Nematoda Nematoda 69.7 1.48e-10   NR CAD6193562.1 2777116 g12131 i0 38.9 0.559006211180124 90 54 55.9 1 63 332 264 352 CAD6193562.1 unnamed protein product [Caenorhabditis auriculariae] diamond 270 69.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis auriculariae
29516697 29516697 PRJNA788929_P_NODE_49250_length_203_cov_6.461538_g48589_i0 PRJNA788929 49250 203 6.461538 13.11692214 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 70.9 1.39e-13   NR KAE9549433.1 2598192 g48589 i0 64.2 3.22167487684729 53 19 78.3 0 11 169 88 140 KAE9549433.1 hypothetical protein FO519_007346, partial [Halicephalobus sp. NKZ332] diamond 654 70.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
30653875 30653875 PRJNA788929_P_NODE_15553_length_425_cov_35.622159_g14894_i0 PRJNA788929 15553 425 35.622159 151.39417575 Mesorhabditis spiculigera 96644 Nematoda Nematoda 50.4 5.19e-4   NR CAJ0575544.1 96644 g14894 i0 39.8 0.585882352941177 83 46 57.9 3 18 263 210 289 CAJ0575544.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 249 50.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
30852787 30852787 PRJNA788929_P_NODE_26934_length_307_cov_1.316239_g26273_i0 PRJNA788929 26934 307 1.316239 4.04085373 root 1 Root_unresolved Root_unresolved 186 8.79e-57   NR ETN71555.1 51031 g26273 i0 86.3 1.99348534201954 102 14 99.7 0 2 307 30 131 ETN71555.1 Replication protein [Necator americanus] diamond 612 186 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
31136894 31136894 PRJNA788929_P_NODE_45535_length_226_cov_10.633987_g44874_i0 PRJNA788929 45535 226 10.633987 24.03281062 root 1 Root_unresolved Root_unresolved 47.8 4.94e-4   NR XP_024510682.1 34506 g44874 i0 84.6 4.65929203539823 26 4 34.5 0 136 213 10 35 XP_024510682.1 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial [Strongyloides ratti] diamond 1053 47.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
31390321 31390321 PRJNA788929_P_NODE_7796_length_668_cov_41.258824_g7154_i0 PRJNA788929 7796 668 41.258824 275.60894432 Rhabditida 6236 Nematoda Nematoda 134 4.48e-36   NR KHN79676.1 6265 g7154 i0 51.2 5.16017964071856 125 60 56.1 1 104 478 9 132 KHN79676.1 40S ribosomal protein S12 [Toxocara canis] diamond 3447 135 0.992592592592593 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
31475943 31475943 PRJNA788929_P_NODE_43396_length_237_cov_9.615854_g42735_i0 PRJNA788929 43396 237 9.615854 22.78957398 Pristionchus entomophagus 358040 Nematoda Nematoda 42.7 0.0351   NR GMS92544.1 358040 g42735 i0 45.7 0.582278481012658 46 25 58.2 0 161 24 147 192 GMS92544.1 hypothetical protein PENTCL1PPCAC_14719, partial [Pristionchus entomophagus] diamond 138 42.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus entomophagus
32361871 32361871 PRJNA788929_P_NODE_44659_length_231_cov_2.481013_g43998_i0 PRJNA788929 44659 231 2.481013 5.73114003 Caenorhabditis bovis 2654633 Nematoda Nematoda 85.9 1.93e-17   NR CAB3406122.1 2654633 g43998 i0 57.4 1.58441558441558 61 26 79.2 0 49 231 1 61 CAB3406122.1 unnamed protein product [Caenorhabditis bovis] diamond 366 85.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis bovis
32371022 32371022 PRJNA788929_P_NODE_15819_length_421_cov_22.204023_g15160_i0 PRJNA788929 15819 421 22.204023 93.47893683 Metazoa 33208 Nematoda Nematoda 146 9.48e-41   NR KHN80245.1 6265 g15160 i0 85.5 66.2850356294537 76 11 54.2 0 398 171 168 243 KHN80245.1 ADP-ribosylation factor 1-like 2 [Toxocara canis] diamond 27906 147 0.993197278911565 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;