RNAquarium Metadata Server
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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA788929" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA788929 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3320336 3320336 PRJNA788929_P_NODE_12403_length_491_cov_45.600478_g11746_i0 PRJNA788929 12403 491 45.600478 223.89834698 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 56.6 4.73e-6   NR XP_004338161.1 1257118 g11746 i0 27.9 1.72912423625255 111 71 66 3 491 168 177 281 XP_004338161.1 uncharacterized protein ACA1_177570 [Acanthamoeba castellanii str. Neff] diamond 849 56.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5873212 5873212 PRJNA788929_P_NODE_5345_length_855_cov_30.852941_g4758_i0 PRJNA788929 5345 855 30.852941 263.79264555 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 414 1.3399999999999996e-143   NR XP_004333661.1 1257118 g4758 i0 80.8 0.933333333333333 266 47 93 3 795 1 1 263 XP_004333661.1 actin bundling protein [Acanthamoeba castellanii str. Neff] diamond 798 414 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17347361 17347361 PRJNA788929_P_NODE_13434_length_467_cov_40.324873_g12777_i0 PRJNA788929 13434 467 40.324873 188.31715691 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 110 7.59e-28   NR XP_004332901.1 1257118 g12777 i0 66.3 3.44967880085653 80 27 51.4 0 25 264 49 128 XP_004332901.1 phosphoenolpyruvate phosphomutase [Acanthamoeba castellanii str. Neff] diamond 1611 110 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26768824 26768824 PRJNA788929_P_NODE_20741_length_358_cov_23.287719_g20081_i0 PRJNA788929 20741 358 23.287719 83.37003402 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 96.7 2.7799999999999996e-23   NR XP_004339691.1 1257118 g20081 i0 72.7 0.460893854748603 55 15 46.1 0 296 132 1 55 XP_004339691.1 ribosomal S29 subunit [Acanthamoeba castellanii str. Neff] diamond 165 96.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27821223 27821223 PRJNA788929_P_NODE_18224_length_387_cov_1.226115_g17564_i0 PRJNA788929 18224 387 1.226115 4.74506505 root 1 Root_unresolved Root_unresolved 47.8 0.00242   NR XP_004337679.1 1257118 g17564 i0 33.8 1.94573643410853 65 38 47.3 2 112 294 166 229 XP_004337679.1 expansin family protein [Acanthamoeba castellanii str. Neff] diamond 753 48.1 0.993762993762994 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27843233 27843233 PRJNA788929_P_NODE_32404_length_275_cov_10.529703_g31743_i0 PRJNA788929 32404 275 10.529703 28.95668325 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 97.1 1.79e-21   NR XP_004341646.1 1257118 g31743 i0 62.3 0.752727272727273 69 25 75.3 1 236 30 318 385 XP_004341646.1 papain family cysteine protease containing protein [Acanthamoeba castellanii str. Neff] diamond 207 97.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27843239 27843239 PRJNA788929_P_NODE_5844_length_804_cov_54.577291_g5242_i0 PRJNA788929 5844 804 54.577291 438.80141964 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 182 4.58e-48   NR XP_004339151.1 1257118 g5242 i0 41.7 0.947761194029851 254 135 92.9 5 28 774 748 993 XP_004339151.1 lysosomal alphamannosidase [Acanthamoeba castellanii str. Neff] diamond 762 182 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28190488 28190488 PRJNA788929_P_NODE_12366_length_492_cov_51.434368_g11709_i0 PRJNA788929 12366 492 51.434368 253.05709056 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 165 6.929999999999998e-47   NR XP_004335426.1 1257118 g11709 i0 53.2 0.847560975609756 139 63 83.5 1 35 445 190 328 XP_004335426.1 cathepsin L, putative [Acanthamoeba castellanii str. Neff] diamond 417 165 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28411838 28411838 PRJNA788929_P_NODE_11586_length_514_cov_35.256236_g10932_i0 PRJNA788929 11586 514 35.256236 181.21705304 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 117 1e-30   NR XP_004340214.1 1257118 g10932 i0 55.9 0.595330739299611 102 42 58.4 2 78 377 1 101 XP_004340214.1 uncharacterized protein ACA1_369260 [Acanthamoeba castellanii str. Neff] diamond 306 117 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30179966 30179966 PRJNA788929_P_NODE_4652_length_932_cov_6.334109_g4114_i0 PRJNA788929 4652 932 6.334109 59.03389588 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 195 6.729999999999998e-55   NR XP_004367884.1 1257118 g4114 i0 41 0.824034334763948 256 148 82.4 3 112 879 214 466 XP_004367884.1 PCI domain containing protein [Acanthamoeba castellanii str. Neff] diamond 768 195 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30401739 30401739 PRJNA788929_P_NODE_48333_length_209_cov_5.213235_g47672_i0 PRJNA788929 48333 209 5.213235 10.89566115 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 56.6 1.05e-7   NR XP_004351534.1 1257118 g47672 i0 47.8 0.660287081339713 46 24 66 0 164 27 136 181 XP_004351534.1 uncharacterized protein ACA1_149250 [Acanthamoeba castellanii str. Neff] diamond 138 56.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30843703 30843703 PRJNA788929_P_NODE_26094_length_312_cov_18.899582_g25433_i0 PRJNA788929 26094 312 18.899582 58.96669584 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 47 4.02e-4   NR XP_004347115.1 1257118 g25433 i0 40.6 1.17307692307692 64 34 59.6 2 224 39 10 71 XP_004347115.1 uncharacterized protein ACA1_384680 [Acanthamoeba castellanii str. Neff] diamond 366 47 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31485241 31485241 PRJNA788929_P_NODE_32556_length_274_cov_16.472637_g31895_i0 PRJNA788929 32556 274 16.472637 45.13502538 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 122 7.269999999999999e-31   NR XP_004341646.1 1257118 g31895 i0 64.9 2.41970802919708 74 26 81 0 253 32 311 384 XP_004341646.1 papain family cysteine protease containing protein [Acanthamoeba castellanii str. Neff] diamond 663 122 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;