RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

25 rows where analysis = "diamond", bioproject = "PRJNA788929" and tax_clade = "core chlorophytes"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 25 ✖

bioproject 1

  • PRJNA788929 · 25 ✖

analysis 1

  • diamond · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
769088 769088 PRJNA788929_P_NODE_15161_length_432_cov_10.727019_g14502_i0 PRJNA788929 15161 432 10.727019 46.34072208 Raphidocelis subcapitata 307507 Plants Plants 157 5.34e-46   NR GBF93448.1 307507 g14502 i0 66.1 37.7222222222222 118 37 79.9 1 374 30 42 159 GBF93448.1 ribosomal protein S1 [Raphidocelis subcapitata] diamond 16296 157 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
2045035 2045035 PRJNA788929_P_NODE_15022_length_434_cov_39.426593_g14363_i0 PRJNA788929 15022 434 39.426593 171.11141362 Eukaryota 2759 Plants Plants 119 1.66e-29   NR CAD7701259.1 121088 g14363 i0 62.9 3.03456221198157 89 32 61.5 1 21 287 188 275 CAD7701259.1 unnamed protein product [Ostreobium quekettii] diamond 1317 119 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
2045640 2045640 PRJNA788929_P_NODE_6542_length_746_cov_25.011887_g5921_i0 PRJNA788929 6542 746 25.011887 186.58867702 Eukaryota 2759 Plants Plants 199 1.01e-60   NR XP_011399223.1 3075 g5921 i0 51 11.6018766756032 192 94 77.2 0 33 608 1 192 XP_011399223.1 60S ribosomal protein L9 [Auxenochlorella protothecoides] diamond 8655 199 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
3320339 3320339 PRJNA788929_P_NODE_12503_length_489_cov_20.723558_g11846_i0 PRJNA788929 12503 489 20.723558 101.33819862 Pedinophyceae sp. YPF-7 765719 Plants Plants 102 1.13e-24   NR CAG9460866.1 765719 g11846 i0 46.8 0.865030674846626 141 56 86.5 2 33 455 1 122 CAG9460866.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 423 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
12249299 12249299 PRJNA788929_P_NODE_930_length_2065_cov_10.487450_g802_i0 PRJNA788929 930 2065 10.48745 216.5658425 Prototheca wickerhamii 3111 Plants Plants 1064 0   NR KAK2075861.1 3111 g802 i0 99.5 0.796125907990315 548 3 79.6 0 1947 304 1 548 KAK2075861.1 hypothetical protein QBZ16_001602 [Prototheca wickerhamii] diamond 1644 1064 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
16071683 16071683 PRJNA788929_P_NODE_1993_length_1492_cov_21.278365_g1737_i0 PRJNA788929 1993 1492 21.278365 317.4732058 Prototheca wickerhamii 3111 Plants Plants 783 3.57e-284   NR KAK2080578.1 3111 g1737 i0 99.7 0.739946380697051 368 1 74 0 1373 270 1 368 KAK2080578.1 hypothetical protein QBZ16_000432 [Prototheca wickerhamii] diamond 1104 783 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
21172168 21172168 PRJNA788929_P_NODE_4897_length_905_cov_45.746394_g4333_i0 PRJNA788929 4897 905 45.746394 414.0048657 Eukaryota 2759 Plants Plants 361 2.44e-122   NR PRW39386.1 3076 g4333 i0 72.8 5.82762430939226 250 66 82.2 1 829 86 1 250 PRW39386.1 40S ribosomal S3a-2 isoform B [Chlorella sorokiniana] diamond 5274 361 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
26999491 26999491 PRJNA788929_P_NODE_8962_length_609_cov_36.050373_g8312_i0 PRJNA788929 8962 609 36.050373 219.54677157 Trebouxiales 2507901 Plants Plants 105 4.35e-25   NR XP_005645013.1 574566 g8312 i0 85.5 0.541871921182266 55 8 27.1 0 24 188 76 130 XP_005645013.1 ribosomal protein S15a component of cytosolic 80S ribosome and 40S small subunit [Coccomyxa subellipsoidea C-169] diamond 330 106 0.990566037735849 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
27496170 27496170 PRJNA788929_P_NODE_47883_length_211_cov_14.913043_g47222_i0 PRJNA788929 47883 211 14.913043 31.46652073 Ulva flexuosa 83791 Plants Plants 87.8 3.16e-18   NR AZP40192.1 83791 g47222 i0 62.5 0.909952606635071 64 24 91 0 15 206 166 229 AZP40192.1 hypothetical protein [Ulva flexuosa] diamond 192 87.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva flexuosa
27780391 27780391 PRJNA788929_P_NODE_17764_length_392_cov_23.037618_g17104_i0 PRJNA788929 17764 392 23.037618 90.30746256 Apatococcus lobatus 904363 Plants Plants 88.2 6.4e-18   NR KAK9817581.1 904363 g17104 i0 57.8 0.948979591836735 64 27 49 0 369 178 245 308 KAK9817581.1 hypothetical protein WJX74_002359 [Apatococcus lobatus] diamond 372 88.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Apatococcus Apatococcus lobatus
27978893 27978893 PRJNA788929_P_NODE_17525_length_395_cov_28.360248_g16865_i0 PRJNA788929 17525 395 28.360248 112.0229796 Trebouxia 13786 Plants Plants 68.9 3.09e-11   NR KAL0037326.1 2905654 g16865 i0 50.6 2.96962025316456 77 35 58.5 2 381 151 140 213 KAL0037326.1 hypothetical protein WJX79_002217 [Trebouxia sp. C0005] diamond 1173 68.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0005
28001459 28001459 PRJNA788929_P_NODE_11905_length_505_cov_26.884259_g11249_i0 PRJNA788929 11905 505 26.884259 135.76550795 Prototheca wickerhamii 3111 Plants Plants 182 4.179999999999999e-55   NR KAK2077127.1 3111 g11249 i0 95.2 0.617821782178218 104 0 58.8 2 383 87 1 104 KAK2077127.1 hypothetical protein QBZ16_004761 [Prototheca wickerhamii] diamond 312 182 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
28948732 28948732 PRJNA788929_P_NODE_4368_length_970_cov_22.907469_g3856_i0 PRJNA788929 4368 970 22.907469 222.2024493 Edaphochlamys debaryana 47281 Plants Plants 222 2.14e-65   NR KAG2485882.1 47281 g3856 i0 55 1.08865979381443 171 77 52.9 0 94 606 161 331 KAG2485882.1 hypothetical protein HYH03_015465 [Edaphochlamys debaryana] diamond 1056 222 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
28980265 28980265 PRJNA788929_P_NODE_9468_length_587_cov_10.807393_g8816_i0 PRJNA788929 9468 587 10.807393 63.43939691 Chlamydomonas schloesseri 2026947 Plants Plants 113 1.62e-26   NR KAG2441235.1 2026947 g8816 i0 41 0.710391822827939 139 79 69.5 1 577 170 100 238 KAG2441235.1 hypothetical protein HYH02_010078 [Chlamydomonas schloesseri] diamond 417 113 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas schloesseri
29138187 29138187 PRJNA788929_P_NODE_13849_length_458_cov_19.488312_g13191_i0 PRJNA788929 13849 458 19.488312 89.25646896 Coccomyxa viridis 1274662 Plants Plants 45.4 0.0163   NR CAK0780326.1 1274662 g13191 i0 47.3 0.96943231441048 55 29 36 0 111 275 109 163 CAK0780326.1 hypothetical protein CVIRNUC_005013 [Coccomyxa viridis] diamond 444 45.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
29273262 29273262 PRJNA788929_P_NODE_15629_length_424_cov_25.532764_g14970_i0 PRJNA788929 15629 424 25.532764 108.25891936 Trebouxiophyceae 75966 Plants Plants 80.9 1.31e-14   NR KAK2079618.1 3111 g14970 i0 59.8 5.625 82 26 53.1 3 413 189 1005 1086 KAK2079618.1 hypothetical protein QBZ16_002013 [Prototheca wickerhamii] diamond 2385 81.6 0.991421568627451 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
29548209 29548209 PRJNA788929_P_NODE_16730_length_407_cov_41.664671_g16071_i0 PRJNA788929 16730 407 41.664671 169.57521097 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 59.3 1.03e-7   NR KAG7673152.1 1650286 g16071 i0 52.1 2.10810810810811 71 28 50.1 3 384 181 119 186 KAG7673152.1 hypothetical protein KSW81_006366 [Chlorella desiccata (nom. nud.)] diamond 858 59.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
29620313 29620313 PRJNA788929_P_NODE_44110_length_233_cov_13.256250_g43449_i0 PRJNA788929 44110 233 13.25625 30.8870625 Coccomyxa 41891 Plants Plants 53.9 3.58e-6   NR KAK9917143.1 248742 g43449 i0 54.9 3.93991416309013 51 21 65.7 1 200 48 90 138 KAK9917143.1 hypothetical protein WJX75_001268 [Coccomyxa subellipsoidea] diamond 918 53.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
29737587 29737587 PRJNA788929_P_NODE_2010_length_1483_cov_22.135461_g1753_i0 PRJNA788929 2010 1483 22.135461 328.26888663 Prototheca wickerhamii 3111 Plants Plants 611 2.58e-217   NR KAK2080631.1 3111 g1753 i0 92 0.679703304113284 336 6 68 1 244 1251 1 315 KAK2080631.1 hypothetical protein QBZ16_000485 [Prototheca wickerhamii] diamond 1008 611 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
29936649 29936649 PRJNA788929_P_NODE_17871_length_391_cov_12.849057_g17211_i0 PRJNA788929 17871 391 12.849057 50.23981287 Chlorophyta 3041 Plants Plants 119 3.4499999999999995e-32   NR XP_011395717.1 3075 g17211 i0 71.1 5.25575447570333 76 22 58.3 0 71 298 1 76 XP_011395717.1 40S ribosomal protein S21 [Auxenochlorella protothecoides] diamond 2055 119 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
30085190 30085190 PRJNA788929_P_NODE_29752_length_289_cov_26.004630_g29091_i0 PRJNA788929 29752 289 26.00463 75.1533807 Ostreobium quekettii 121088 Plants Plants 113 1.7000000000000002e-27   NR CAD7695328.1 121088 g29091 i0 54 0.903114186851211 87 40 90.3 0 266 6 303 389 CAD7695328.1 unnamed protein product [Ostreobium quekettii] diamond 261 113 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
30116778 30116778 PRJNA788929_P_NODE_28032_length_299_cov_63.008850_g27371_i0 PRJNA788929 28032 299 63.00885 188.3964615 Pedinophyceae sp. YPF-7 765719 Plants Plants 45.1 0.0113   NR CAG9463377.1 765719 g27371 i0 47.6 0.421404682274247 42 21 42.1 1 35 160 733 773 CAG9463377.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 126 45.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
31896174 31896174 PRJNA788929_P_NODE_35517_length_260_cov_15.850267_g34856_i0 PRJNA788929 35517 260 15.850267 41.2106942 Eukaryota 2759 Plants Plants 82 5.6e-18   NR PRW57963.1 3076 g34856 i0 58 2.31923076923077 69 29 79.6 0 249 43 40 108 PRW57963.1 Thioredoxin H-type [Chlorella sorokiniana] diamond 603 82.4 0.995145631067961 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
32583198 32583198 PRJNA788929_P_NODE_3439_length_1115_cov_24.928983_g3024_i0 PRJNA788929 3439 1115 24.928983 277.95816045 Bryopsis sp. KO-2 3115439 Plants Plants 306 6.189999999999998e-96   NR GMH43207.1 3041901 g3024 i0 42.2 3.43318385650224 422 139 88.5 3 10 996 135 544 GMH43207.1 hypothetical protein BSKO_11129 [Bryopsis sp. KO-2023] diamond 3828 306 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
32834829 32834829 PRJNA788929_P_NODE_21660_length_349_cov_22.079710_g20999_i0 PRJNA788929 21660 349 22.07971 77.0581879 Symbiochloris irregularis 706552 Plants Plants 74.7 1.7e-13   NR KAK9808539.1 706552 g20999 i0 60.7 1.4269340974212 56 22 48.1 0 325 158 178 233 KAK9808539.1 hypothetical protein WJX73_006377 [Symbiochloris irregularis] diamond 498 74.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;