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contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA785164" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA785164 · 21 ✖

analysis 1

  • diamond · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26768767 26768767 PRJNA785164_P_NODE_36681_length_298_cov_1.884444_g36216_i0 PRJNA785164 36681 298 1.884444 5.61564312 Prosthecobacter sp. 1965333 Bacteria Bacteria 169 2.459999999999999e-47   NR WP_395734110.1 1965333 g36216 i0 84.5 1.90268456375839 97 15 97.7 0 2 292 351 447 WP_395734110.1 hypothetical protein [Prosthecobacter sp.] diamond 567 169 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
27022081 27022081 PRJNA785164_P_NODE_54002_length_248_cov_1.440000_g53537_i0 PRJNA785164 54002 248 1.44 3.5712 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 110 5.4e-26   NR HYE22720.1 2499141 g53537 i0 59.3 0.979838709677419 81 32 98 1 5 247 463 542 HYE22720.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 243 110 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
27148038 27148038 PRJNA785164_P_NODE_52022_length_250_cov_1.305085_g51557_i0 PRJNA785164 52022 250 1.305085 3.2627125 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 77.4 2.45e-14   NR HCN76481.1 2026801 g51557 i0 54.2 1.98 83 37 98.4 1 3 248 157 239 HCN76481.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 495 77.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
27379245 27379245 PRJNA785164_P_NODE_45763_length_266_cov_1.326425_g45298_i0 PRJNA785164 45763 266 1.326425 3.5282905 Bacteria 2 Bacteria Bacteria 95.9 1.02e-20   NR MBN9691296.1 2026799 g45298 i0 51.2 1.90601503759399 82 40 92.5 0 263 18 614 695 MBN9691296.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 507 95.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27969615 27969615 PRJNA785164_P_NODE_41485_length_280_cov_1.193237_g41020_i0 PRJNA785164 41485 280 1.193237 3.3410636 Luteolibacter yonseiensis 1144680 Bacteria Bacteria 131 9.2e-34   NR WP_200351467.1 1144680 g41020 i0 68.9 1.93928571428571 90 28 96.4 0 8 277 82 171 WP_200351467.1 hypothetical protein [Luteolibacter yonseiensis] diamond 543 131 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter yonseiensis
28474893 28474893 PRJNA785164_P_NODE_25786_length_365_cov_1.054795_g25321_i0 PRJNA785164 25786 365 1.054795 3.85000175 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 79.3 2.17e-14   NR MEI6198185.1 2026799 g25321 i0 46.5 1.70958904109589 99 52 81.4 1 356 60 285 382 MEI6198185.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 624 79.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28758937 28758937 PRJNA785164_P_NODE_44447_length_270_cov_1.563452_g43982_i0 PRJNA785164 44447 270 1.563452 4.2213204 Opitutales bacterium 2026772 Bacteria Bacteria 75.1 1.33e-13   NR MCH8476057.1 2026772 g43982 i0 48.8 1.84444444444444 86 43 95.6 1 12 269 20 104 MCH8476057.1 hypothetical protein [Opitutales bacterium] diamond 498 75.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
29336632 29336632 PRJNA785164_P_NODE_46349_length_264_cov_1.612565_g45884_i0 PRJNA785164 46349 264 1.612565 4.2571716 root 1 Root_unresolved Root_unresolved 103 1.9799999999999998e-23   NR MDB4350882.1 2026799 g45884 i0 59.3 1.95454545454545 86 35 97.7 0 262 5 249 334 MDB4350882.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 516 103 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29358980 29358980 PRJNA785164_P_NODE_25089_length_371_cov_1.758389_g24624_i0 PRJNA785164 25089 371 1.758389 6.52362319 Opitutaceae bacterium 2006848 Bacteria Bacteria 123 4.23e-30   NR MFA5056517.1 2006848 g24624 i0 52.6 0.93800539083558 116 55 93.8 0 370 23 232 347 MFA5056517.1 anti-CBASS Acb1 family protein [Opitutaceae bacterium] diamond 348 123 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
30780338 30780338 PRJNA785164_P_NODE_44454_length_270_cov_1.558376_g43989_i0 PRJNA785164 44454 270 1.558376 4.2076152 Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_1 1802433 Bacteria Bacteria 100 1.21e-22   NR OHE77780.1 1802433 g43989 i0 57.3 0.988888888888889 89 35 98.9 2 3 269 181 266 OHE77780.1 MAG: hypothetical protein A3F67_08045 [Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10] diamond 267 100 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10
31444085 31444085 PRJNA785164_P_NODE_57836_length_245_cov_0.895349_g57371_i0 PRJNA785164 57836 245 0.895349 2.19360505 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 67.4 7.51e-11   NR MBX3740818.1 2562705 g57371 i0 65.4 0.991836734693878 81 28 99.2 0 245 3 46 126 MBX3740818.1 2-oxo acid dehydrogenase subunit E2 [Akkermansiaceae bacterium] diamond 243 67.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
31475887 31475887 PRJNA785164_P_NODE_50336_length_253_cov_1.238889_g49871_i0 PRJNA785164 50336 253 1.238889 3.13438917 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 66.2 2.21e-10   NR HVU07847.1 2499141 g49871 i0 41 0.924901185770751 78 46 92.5 0 249 16 124 201 HVU07847.1 phage portal protein [Verrucomicrobiia bacterium] diamond 234 66.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31507578 31507578 PRJNA785164_P_NODE_48236_length_259_cov_1.064516_g47771_i0 PRJNA785164 48236 259 1.064516 2.75709644 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 60.1 1.1e-8   NR HZV34088.1 2499141 g47771 i0 48.5 0.787644787644788 68 35 78.8 0 56 259 112 179 HZV34088.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 204 60.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31539154 31539154 PRJNA785164_P_NODE_51076_length_251_cov_1.101124_g50611_i0 PRJNA785164 51076 251 1.101124 2.76382124 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 78.2 9.87e-16   NR MBE7497145.1 2026800 g50611 i0 65 2.34262948207171 60 21 71.7 0 219 40 124 183 MBE7497145.1 molybdenum cofactor guanylyltransferase [Verrucomicrobiaceae bacterium] diamond 588 78.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
31697165 31697165 PRJNA785164_P_NODE_24077_length_381_cov_0.928571_g23612_i0 PRJNA785164 24077 381 0.928571 3.53785551 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 53.5 1.09e-6   NR RPJ30610.1 2026800 g23612 i0 51 0.385826771653543 49 24 38.6 0 88 234 2 50 RPJ30610.1 MAG: hypothetical protein EHM17_16370 [Verrucomicrobiaceae bacterium] diamond 147 53.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
31791838 31791838 PRJNA785164_P_NODE_61377_length_241_cov_2.351190_g60912_i0 PRJNA785164 61377 241 2.35119 5.6663679 Opitutaceae bacterium 2006848 Bacteria Bacteria 64.3 8.51e-10   NR MFA5262197.1 2006848 g60912 i0 44.4 3.84647302904564 72 39 89.6 1 3 218 111 181 MFA5262197.1 terminase family protein [Opitutaceae bacterium] diamond 927 64.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
31823539 31823539 PRJNA785164_P_NODE_28917_length_341_cov_1.414179_g28452_i0 PRJNA785164 28917 341 1.414179 4.82235039 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 60.5 6.85e-8   NR HXK07758.1 2499141 g28452 i0 36.5 3.01759530791789 115 69 99.4 3 2 340 455 567 HXK07758.1 SBBP repeat-containing protein [Verrucomicrobiia bacterium] diamond 1029 60.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
32171919 32171919 PRJNA785164_P_NODE_56458_length_246_cov_0.890173_g55993_i0 PRJNA785164 56458 246 0.890173 2.18982558 Opitutaceae bacterium 2006848 Bacteria Bacteria 99.8 1.19e-22   NR MCC6414779.1 2006848 g55993 i0 63.5 0.902439024390244 74 26 89 1 2 220 20 93 MCC6414779.1 AAA family ATPase [Opitutaceae bacterium] diamond 222 99.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
32266862 32266862 PRJNA785164_P_NODE_36098_length_301_cov_1.530702_g35633_i0 PRJNA785164 36098 301 1.530702 4.60741302 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 61.6 1.34e-9   NR MFQ3577770.1 2499141 g35633 i0 45.3 0.637873754152824 64 34 62.8 1 31 219 28 91 MFQ3577770.1 AAA family ATPase [Verrucomicrobiia bacterium] diamond 192 61.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
32361825 32361825 PRJNA785164_P_NODE_52599_length_250_cov_0.870056_g52134_i0 PRJNA785164 52599 250 0.870056 2.17514 Opitutaceae bacterium 2006848 Bacteria Bacteria 90.9 4.27e-19   NR MFA5056517.1 2006848 g52134 i0 52.5 0.96 80 38 96 0 1 240 231 310 MFA5056517.1 anti-CBASS Acb1 family protein [Opitutaceae bacterium] diamond 240 90.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
32866263 32866263 PRJNA785164_P_NODE_34900_length_307_cov_1.316239_g34435_i0 PRJNA785164 34900 307 1.316239 4.04085373 Verrucomicrobium spinosum 2736 Bacteria Bacteria 85.1 4.78e-17   NR WP_082408217.1 2736 g34435 i0 57.1 1.36807817589577 70 27 65.5 2 217 17 22 91 WP_082408217.1 replicative DNA helicase [Verrucomicrobium spinosum] diamond 420 85.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Verrucomicrobium Verrucomicrobium spinosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;