RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA785164" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA785164 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3317484 3317484 PRJNA785164_P_NODE_39883_length_285_cov_2.226415_g39418_i0 PRJNA785164 39883 285 2.226415 6.34528275 Minisyncoccota bacterium 2053589 Bacteria Bacteria 152 1.46e-42   NR MBP6912888.1 2053589 g39418 i0 96.3 0.842105263157895 80 3 84.2 0 241 2 1 80 MBP6912888.1 recombinase RecA [Candidatus Paceibacterota bacterium] diamond 240 152 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
8419428 8419428 PRJNA785164_P_NODE_44647_length_269_cov_2.265306_g44182_i0 PRJNA785164 44647 269 2.265306 6.09367314 Minisyncoccota bacterium 2053589 Bacteria Bacteria 152 4.529999999999999e-42   NR HEX4799160.1 2053589 g44182 i0 88.2 4.73977695167286 85 10 94.8 0 267 13 232 316 HEX4799160.1 serine hydroxymethyltransferase [Candidatus Paceibacterota bacterium] diamond 1275 152 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
26736709 26736709 PRJNA785164_P_NODE_35321_length_305_cov_1.146552_g34856_i0 PRJNA785164 35321 305 1.146552 3.4969836 Minisyncoccota bacterium 2053589 Bacteria Bacteria 104 1.1799999999999999e-23   NR MFA6097568.1 2053589 g34856 i0 56.4 0.99344262295082 101 39 95.4 2 305 15 221 320 MFA6097568.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 303 104 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27243288 27243288 PRJNA785164_P_NODE_36123_length_301_cov_1.350877_g35658_i0 PRJNA785164 36123 301 1.350877 4.06613977 Minisyncoccota bacterium 2053589 Bacteria Bacteria 79 9.58e-17   NR MFA6386855.1 2053589 g35658 i0 57.4 0.60797342192691 61 22 56.8 2 130 300 3 63 MFA6386855.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 183 79 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28001415 28001415 PRJNA785164_P_NODE_27885_length_348_cov_1.414545_g27420_i0 PRJNA785164 27885 348 1.414545 4.9226166 Minisyncoccota bacterium 2053589 Bacteria Bacteria 56.6 6.33e-8   NR MBP6857741.1 2053589 g27420 i0 53.7 0.46551724137931 54 25 46.6 0 185 346 1 54 MBP6857741.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 162 56.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28095957 28095957 PRJNA785164_P_NODE_62245_length_241_cov_0.916667_g61780_i0 PRJNA785164 62245 241 0.916667 2.20916747 Minisyncoccota bacterium 2053589 Bacteria Bacteria 127 3.47e-32   NR MDI9407820.1 2053589 g61780 i0 89.5 1.89211618257261 76 8 94.6 0 230 3 399 474 MDI9407820.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 456 127 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29895809 29895809 PRJNA785164_P_NODE_52911_length_249_cov_1.704545_g52446_i0 PRJNA785164 52911 249 1.704545 4.24431705 Minisyncoccota bacterium 2053589 Bacteria Bacteria 42.7 0.0213   NR HEY6020168.1 2053589 g52446 i0 42.1 0.91566265060241 76 38 88 3 5 223 69 141 HEY6020168.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 228 42.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30464804 30464804 PRJNA785164_P_NODE_40313_length_284_cov_1.227488_g39848_i0 PRJNA785164 40313 284 1.227488 3.48606592 Minisyncoccota bacterium 2053589 Bacteria Bacteria 87 2.9e-19   NR MDP7158977.1 2053589 g39848 i0 48.9 5.98943661971831 94 37 91.9 2 22 282 4 93 MDP7158977.1 ATP-binding protein [Candidatus Paceibacterota bacterium] diamond 1701 87 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;