RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA785164" and tax_phylum = "Heterolobosea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA785164 · 24 ✖

analysis 1

  • diamond · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9694581 9694581 PRJNA785164_P_NODE_42408_length_277_cov_1.132353_g41943_i0 PRJNA785164 42408 277 1.132353 3.13661781 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 167 3.5699999999999997e-48   NR XP_002675188.1 5762 g41943 i0 85.9 0.996389891696751 92 13 99.6 0 1 276 42 133 XP_002675188.1 uncharacterized protein NAEGRDRAFT_69585 [Naegleria gruberi] diamond 276 167 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10142186 10142186 PRJNA785164_P_NODE_56808_length_246_cov_0.890173_g56343_i0 PRJNA785164 56808 246 0.890173 2.18982558 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 109 1.84e-26   NR XP_002670828.1 5762 g56343 i0 90.3 0.75609756097561 62 4 75.6 1 187 2 273 332 XP_002670828.1 uncharacterized protein NAEGRDRAFT_81728 [Naegleria gruberi] diamond 186 109 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26642084 26642084 PRJNA785164_P_NODE_40861_length_282_cov_1.473684_g40396_i0 PRJNA785164 40861 282 1.473684 4.15578888 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 59.3 8.5e-8   NR XP_002671371.1 5762 g40396 i0 30.1 0.98936170212766 93 63 98.9 1 280 2 298 388 XP_002671371.1 uncharacterized protein NAEGRDRAFT_59475 [Naegleria gruberi] diamond 279 59.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26736712 26736712 PRJNA785164_P_NODE_46441_length_264_cov_1.261780_g45976_i0 PRJNA785164 46441 264 1.26178 3.3310992 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 177 1.5e-51   NR XP_002679383.1 5762 g45976 i0 94.3 2 88 5 100 0 1 264 66 153 XP_002679383.1 glutamate-1-semialdehyde aminotransferase [Naegleria gruberi] diamond 528 177 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26736716 26736716 PRJNA785164_P_NODE_52961_length_249_cov_1.545455_g52496_i0 PRJNA785164 52961 249 1.545455 3.84818295 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 53.9 4.85e-6   NR XP_002673836.1 5762 g52496 i0 48.7 0.469879518072289 39 20 47 0 1 117 1040 1078 XP_002673836.1 protein kinase [Naegleria gruberi] diamond 117 53.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27053732 27053732 PRJNA785164_P_NODE_55522_length_247_cov_0.885057_g55057_i0 PRJNA785164 55522 247 0.885057 2.18609079 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 64.7 7.06e-10   NR XP_002669687.1 5762 g55057 i0 57.8 0.546558704453441 45 19 54.7 0 6 140 964 1008 XP_002669687.1 uncharacterized protein NAEGRDRAFT_75306 [Naegleria gruberi] diamond 135 64.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27464612 27464612 PRJNA785164_P_NODE_42963_length_275_cov_1.267327_g42498_i0 PRJNA785164 42963 275 1.267327 3.48514925 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 171 7.9e-53   NR XP_002676280.1 5762 g42498 i0 91.1 0.981818181818182 90 8 98.2 0 270 1 7 96 XP_002676280.1 uncharacterized protein NAEGRDRAFT_39446 [Naegleria gruberi] diamond 270 171 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27780370 27780370 PRJNA785164_P_NODE_61084_length_242_cov_0.911243_g60619_i0 PRJNA785164 61084 242 0.911243 2.20520806 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 146 1.07e-38   NR XP_002679477.1 5762 g60619 i0 92.5 0.991735537190083 80 6 99.2 0 2 241 450 529 XP_002679477.1 RCC1 domain-containing protein [Naegleria gruberi] diamond 240 146 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28285160 28285160 PRJNA785164_P_NODE_17786_length_462_cov_3.000000_g17321_i0 PRJNA785164 17786 462 3 13.86 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 219 1.86e-64   NR XP_002680413.1 5762 g17321 i0 79.3 0.941558441558442 145 30 94.2 0 460 26 589 733 XP_002680413.1 uncharacterized protein NAEGRDRAFT_57206 [Naegleria gruberi] diamond 435 219 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28380104 28380104 PRJNA785164_P_NODE_49526_length_255_cov_1.368132_g49061_i0 PRJNA785164 49526 255 1.368132 3.4887366 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 77.4 2.21e-14   NR XP_002682055.1 5762 g49061 i0 52.6 0.894117647058824 76 30 82.4 2 5 214 326 401 XP_002682055.1 uncharacterized protein NAEGRDRAFT_78141 [Naegleria gruberi] diamond 228 77.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28758938 28758938 PRJNA785164_P_NODE_45087_length_268_cov_1.323077_g44622_i0 PRJNA785164 45087 268 1.323077 3.54584636 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 98.2 6.18e-22   NR XP_002677260.1 5762 g44622 i0 64.6 1.07462686567164 96 27 99.6 4 267 1 18 113 XP_002677260.1 uncharacterized protein NAEGRDRAFT_79800 [Naegleria gruberi] diamond 288 98.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28885200 28885200 PRJNA785164_P_NODE_51588_length_251_cov_0.865169_g51123_i0 PRJNA785164 51588 251 0.865169 2.17157419 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 80.1 2.96e-15   NR XP_002678898.1 5762 g51123 i0 78.9 0.848605577689243 71 9 77.7 4 251 57 458 528 XP_002678898.1 uncharacterized protein NAEGRDRAFT_48062 [Naegleria gruberi] diamond 213 80.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28916655 28916655 PRJNA785164_P_NODE_51128_length_251_cov_0.865169_g50663_i0 PRJNA785164 51128 251 0.865169 2.17157419 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 84.3 9.44e-17   NR XP_002682200.1 5762 g50663 i0 61.4 0.99203187250996006 83 26 98 4 246 1 840 917 XP_002682200.1 uncharacterized protein NAEGRDRAFT_56686 [Naegleria gruberi] diamond 249 84.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29138153 29138153 PRJNA785164_P_NODE_52829_length_249_cov_2.181818_g52364_i0 PRJNA785164 52829 249 2.181818 5.43272682 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 130 5.83e-33   NR XP_002670987.1 5762 g52364 i0 79.5 1 83 17 100 0 1 249 876 958 XP_002670987.1 uncharacterized protein NAEGRDRAFT_73934 [Naegleria gruberi] diamond 249 130 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29548170 29548170 PRJNA785164_P_NODE_52250_length_250_cov_0.870056_g51785_i0 PRJNA785164 52250 250 0.870056 2.17514 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 164 5.34e-47   NR XP_002669736.1 5762 g51785 i0 94 0.996 83 5 99.6 0 249 1 312 394 XP_002669736.1 tyrosine aminotransferase [Naegleria gruberi] diamond 249 164 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29642741 29642741 PRJNA785164_P_NODE_47430_length_261_cov_1.473404_g46965_i0 PRJNA785164 47430 261 1.473404 3.84558444 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 169 1.57e-46   NR XP_002681827.1 5762 g46965 i0 96.5 0.988505747126437 86 3 98.9 0 3 260 1152 1237 XP_002681827.1 serine/threonine protein kinase [Naegleria gruberi] diamond 258 169 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29674320 29674320 PRJNA785164_P_NODE_56710_length_246_cov_0.890173_g56245_i0 PRJNA785164 56710 246 0.890173 2.18982558 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 100 2.62e-22   NR XP_002671310.1 5762 g56245 i0 83.1 1.01219512195122 83 13 100 1 1 246 511 593 XP_002671310.1 uncharacterized protein NAEGRDRAFT_81558 [Naegleria gruberi] diamond 249 100 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29927461 29927461 PRJNA785164_P_NODE_57071_length_245_cov_1.790698_g56606_i0 PRJNA785164 57071 245 1.790698 4.3872101 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 102 1.79e-26   NR XP_044559565.1 5763 g56606 i0 62 1.6530612244898 71 27 86.9 0 243 31 9 79 XP_044559565.1 uncharacterized protein FDP41_006326 [Naegleria fowleri] diamond 405 102 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
30338475 30338475 PRJNA785164_P_NODE_57272_length_245_cov_1.343023_g56807_i0 PRJNA785164 57272 245 1.343023 3.29040635 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 50.8 5.45e-5   NR XP_044556432.1 5763 g56807 i0 37 0.991836734693878 81 48 95.5 1 235 2 660 740 XP_044556432.1 uncharacterized protein FDP41_009939 [Naegleria fowleri] diamond 243 50.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
30780344 30780344 PRJNA785164_P_NODE_59694_length_243_cov_0.905882_g59229_i0 PRJNA785164 59694 243 0.905882 2.20129326 Acrasis kona 1008807 Heterolobosea other_Eukaryota 80.5 8.88e-16   NR KAL0485777.1 1008807 g59229 i0 56.3 0.876543209876543 71 31 87.7 0 241 29 37 107 KAL0485777.1 Hm13 [Acrasis kona] diamond 213 80.5 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30906952 30906952 PRJNA785164_P_NODE_53214_length_249_cov_0.875000_g52749_i0 PRJNA785164 53214 249 0.875 2.17875 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 90.9 1.74e-19   NR XP_002671338.1 5762 g52749 i0 95.2 1 83 4 100 0 1 249 248 330 XP_002671338.1 uncharacterized protein NAEGRDRAFT_73677 [Naegleria gruberi] diamond 249 90.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31033399 31033399 PRJNA785164_P_NODE_33715_length_313_cov_1.391667_g33250_i0 PRJNA785164 33715 313 1.391667 4.35591771 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 179 1.04e-49   NR XP_002670987.1 5762 g33250 i0 89.4 0.996805111821086 104 11 99.7 0 1 312 1066 1169 XP_002670987.1 uncharacterized protein NAEGRDRAFT_73934 [Naegleria gruberi] diamond 312 179 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31127524 31127524 PRJNA785164_P_NODE_25655_length_366_cov_1.433447_g25190_i0 PRJNA785164 25655 366 1.433447 5.24641602 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 126 5.22e-31   NR XP_002671974.1 5762 g25190 i0 49.2 1 122 61 99.2 1 365 3 493 614 XP_002671974.1 uncharacterized protein NAEGRDRAFT_59331 [Naegleria gruberi] diamond 366 126 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32623585 32623585 PRJNA785164_P_NODE_57980_length_245_cov_0.895349_g57515_i0 PRJNA785164 57980 245 0.895349 2.19360505 Naegleria 5761 Heterolobosea other_Eukaryota 149 3.37e-44   NR XP_002677053.1 5762 g57515 i0 92.6 2.97551020408163 81 6 99.2 0 2 244 15 95 XP_002677053.1 uncharacterized protein NAEGRDRAFT_36778 [Naegleria gruberi] diamond 729 149 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;