RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA785164" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA785164 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26610264 26610264 PRJNA785164_P_NODE_54381_length_248_cov_0.880000_g53916_i0 PRJNA785164 54381 248 0.88 2.1824 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 147 2.51e-39   NR MDP1880394.1 2052176 g53916 i0 86.3 3.87096774193548 80 11 96.8 0 3 242 543 622 MDP1880394.1 FAD-dependent oxidoreductase [Parachlamydiaceae bacterium] diamond 960 147 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
27780360 27780360 PRJNA785164_P_NODE_26964_length_355_cov_1.482270_g26499_i0 PRJNA785164 26964 355 1.48227 5.2620585 Chlamydiales bacterium 2047757 Bacteria Bacteria 148 6.0199999999999986e-40   NR HSX38694.1 2047757 g26499 i0 62.7 0.929577464788732 110 41 93 0 16 345 17 126 HSX38694.1 Tol-Pal system protein TolB [Chlamydiales bacterium] diamond 330 148 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
28474902 28474902 PRJNA785164_P_NODE_55826_length_247_cov_0.885057_g55361_i0 PRJNA785164 55826 247 0.885057 2.18609079 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 122 7.2399999999999994e-31   NR MEI8125804.1 2052176 g55361 i0 75 0.923076923076923 76 19 92.3 0 230 3 17 92 MEI8125804.1 MFS transporter [Parachlamydiaceae bacterium] diamond 228 122 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
29011929 29011929 PRJNA785164_P_NODE_41488_length_280_cov_1.188406_g41023_i0 PRJNA785164 41488 280 1.188406 3.3275368 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 82.4 6.08e-16   NR MBY0530316.1 2047756 g41023 i0 100 0.45 42 0 45 0 280 155 439 480 MBY0530316.1 putative DNA binding domain-containing protein [Rhabdochlamydiaceae bacterium] diamond 126 82.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
30527536 30527536 PRJNA785164_P_NODE_61013_length_242_cov_0.911243_g60548_i0 PRJNA785164 61013 242 0.911243 2.20520806 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 160 2.83e-45   NR MBY0529750.1 2047756 g60548 i0 100 0.991735537190083 80 0 99.2 0 1 240 369 448 MBY0529750.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Rhabdochlamydiaceae bacterium] diamond 240 160 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
30685441 30685441 PRJNA785164_P_NODE_55253_length_247_cov_1.080460_g54788_i0 PRJNA785164 55253 247 1.08046 2.6687362 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 132 1.17e-33   NR MFI0435464.1 2052176 g54788 i0 73.8 0.97165991902834 80 21 97.2 0 247 8 307 386 MFI0435464.1 Hsp70 family protein [Parachlamydiaceae bacterium] diamond 240 132 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
31728686 31728686 PRJNA785164_P_NODE_43837_length_272_cov_1.542714_g43372_i0 PRJNA785164 43837 272 1.542714 4.19618208 Chlamydiia bacterium 2052156 Bacteria Bacteria 157 2.74e-44   NR MCB1081949.1 2052156 g43372 i0 76.4 5.90073529411765 89 21 98.2 0 5 271 209 297 MCB1081949.1 ATP-binding protein [Chlamydiia bacterium] diamond 1605 157 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
32771763 32771763 PRJNA785164_P_NODE_22580_length_396_cov_3.947368_g22115_i0 PRJNA785164 22580 396 3.947368 15.63157728 Parachlamydiales bacterium 2052178 Bacteria Bacteria 91.3 4.920000000000001e-21   NR MFA6917207.1 2052178 g22115 i0 52.1 1.09090909090909 73 35 55.3 0 229 11 9 81 MFA6917207.1 hypothetical protein [Parachlamydiales bacterium] diamond 432 91.3 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales     Parachlamydiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;