RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA785164" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 3 ✖

bioproject 1

  • PRJNA785164 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27811987 27811987 PRJNA785164_P_NODE_25764_length_365_cov_1.438356_g25299_i0 PRJNA785164 25764 365 1.438356 5.2499994 Cressdnaviricota sp. 2748378 Viruses Viruses 154 1.53e-43   NR AXH73382.1 2748378 g25299 i0 72.3 0.772602739726027 94 26 77.3 0 295 14 178 271 AXH73382.1 MAG: putative viral replication protein [Cressdnaviricota sp.] diamond 282 154 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
29241893 29241893 PRJNA785164_P_NODE_63509_length_232_cov_2.194969_g63044_i0 PRJNA785164 63509 232 2.194969 5.09232808 Viruses 10239 Viruses Viruses 51.2 3.12e-5   NR WAE42583.1 2748378 g63044 i0 50 1.125 48 23 60.8 1 73 213 143 190 WAE42583.1 MAG: replication associated protein [Cressdnaviricota sp.] diamond 261 51.2 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
30622235 30622235 PRJNA785164_P_NODE_17733_length_463_cov_2.489744_g17268_i0 PRJNA785164 17733 463 2.489744 11.52751472 Parvoviridae sp. 1940570 Viruses Viruses 57.8 1.88e-6   NR WCR62122.1 1940570 g17268 i0 30.1 0.926565874730022 143 66 91.4 6 458 36 307 417 WCR62122.1 MAG: capsid protein [Parvoviridae sp.] diamond 429 57.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;