RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA785164" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA785164 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3317025 3317025 PRJNA785164_P_NODE_20243_length_424_cov_2.518519_g19778_i0 PRJNA785164 20243 424 2.518519 10.67852056 African cichlid piscichuvirus 3065075 Viruses Viruses 92 1.77e-18   NR WLN26256.1 3065075 g19778 i0 50 0.650943396226415 92 46 65.1 0 303 28 229 320 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 276 92 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
29453307 29453307 PRJNA785164_P_NODE_8090_length_802_cov_3.625514_g7675_i0 PRJNA785164 8090 802 3.625514 29.07662228 Sea turtle neural virus 1 3112944 Viruses Viruses 49.3 0.0109   NR WET19891.1 3112944 g7675 i0 52.5 0.149625935162095 40 19 15 0 800 681 458 497 WET19891.1 MAG: nucleoprotein [Sea turtle neural virus 1] diamond 120 49.3 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Sea turtle neural virus 1
30338469 30338469 PRJNA785164_P_NODE_42512_length_276_cov_2.088670_g42047_i0 PRJNA785164 42512 276 2.08867 5.7647292 African cichlid piscichuvirus 3065075 Viruses Viruses 67.4 1.2e-10   NR WLN26256.1 3065075 g42047 i0 39.8 0.956521739130435 88 53 95.7 0 12 275 90 177 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 264 67.4 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;