RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA785164" and tax_clade = "Candidatus Pacearchaeota"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Candidatus Pacearchaeota · 2 ✖

bioproject 1

  • PRJNA785164 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_phylum 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29864096 29864096 PRJNA785164_P_NODE_49111_length_256_cov_1.639344_g48646_i0 PRJNA785164 49111 256 1.639344 4.19672064 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 62.8 9.52e-10   NR MCK5606851.1 2026773 g48646 i0 42.5 0.9375 80 43 91.4 3 244 11 1 79 MCK5606851.1 methyltransferase domain-containing protein [Candidatus Pacearchaeota archaeon] diamond 240 62.8 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
29905117 29905117 PRJNA785164_P_NODE_47711_length_260_cov_1.647059_g47246_i0 PRJNA785164 47711 260 1.647059 4.2823534 root 1 Root_unresolved Root_unresolved 51.6 3.13e-5   NR MEM4270779.1 2026773 g47246 i0 61.9 0.992307692307692 42 16 48.5 0 131 6 4 45 MEM4270779.1 DUF5309 family protein [Candidatus Pacearchaeota archaeon] diamond 258 52 0.992307692307692 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;