RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA784979" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA784979 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28601245 28601245 PRJNA784979_S_NODE_10187_length_167_cov_1.296610_g10145_i0 PRJNA784979 10187 167 1.29661 2.1653387 Candidatus Methanofastidiosia archaeon 2099674 Archaea Archaea 84.3 7.73e-18   NR NMC57893.1 2099674 g10145 i0 69.2 2.80239520958084 52 16 93.4 0 158 3 214 265 NMC57893.1 UDP-glucose/GDP-mannose dehydrogenase family protein [Candidatus Methanofastidiosia archaeon] diamond 468 84.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia       Candidatus Methanofastidiosia archaeon
30401676 30401676 PRJNA784979_S_NODE_7413_length_187_cov_1.072464_g7371_i0 PRJNA784979 7413 187 1.072464 2.00550768 Halococcoides cellulosivorans 1679096 Archaea Archaea 42 0.0294   NR WP_108383978.1 1679096 g7371 i0 44.7 0.754010695187166 47 26 75.4 0 164 24 27 73 WP_108383978.1 nucleotidyltransferase domain-containing protein [Halococcoides cellulosivorans] diamond 141 42 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halococcoides Halococcoides cellulosivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;