contig_metadata
9 rows where analysis = "diamond", bioproject = "PRJNA784298" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8418336 | 8418336 | PRJNA784298_P_NODE_11307_length_372_cov_2.765886_g11106_i0 | PRJNA784298 | 11307 | 372 | 2.765886 | 10.28909592 | Pleomorphochaeta sp. | 1920505 | Bacteria | Bacteria | 92 | 6.78e-20 | NR | MDC7243806.1 | 1920505 | g11106 | i0 | 55.8 | 3.10483870967742 | 77 | 34 | 62.1 | 0 | 231 | 1 | 2 | 78 | MDC7243806.1 Fe-S cluster assembly ATPase SufC [Pleomorphochaeta sp.] | diamond | 1155 | 92 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Pleomorphochaeta | Pleomorphochaeta sp. | ||
| 9693667 | 9693667 | PRJNA784298_P_NODE_18788_length_285_cov_2.127358_g18587_i0 | PRJNA784298 | 18788 | 285 | 2.127358 | 6.0629703 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 161 | 1.27e-44 | NR | MDY6933431.1 | 2202144 | g18587 | i0 | 76.6 | 1.97894736842105 | 94 | 22 | 98.9 | 0 | 284 | 3 | 84 | 177 | MDY6933431.1 site-specific DNA-methyltransferase [Spirochaetota bacterium] | diamond | 564 | 161 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 27315982 | 27315982 | PRJNA784298_P_NODE_19863_length_277_cov_1.887255_g19662_i0 | PRJNA784298 | 19863 | 277 | 1.887255 | 5.22769635 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 57.8 | 1.77e-7 | NR | WP_021958633.1 | 29522 | g19662 | i0 | 75.8 | 3.99638989169675 | 33 | 8 | 35.7 | 0 | 273 | 175 | 209 | 241 | WP_021958633.1 Bax inhibitor-1/YccA family membrane protein [Brachyspira aalborgi] | diamond | 1107 | 58.2 | 0.993127147766323 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira aalborgi | ||
| 28010722 | 28010722 | PRJNA784298_P_NODE_18785_length_285_cov_2.169811_g18584_i0 | PRJNA784298 | 18785 | 285 | 2.169811 | 6.18396135 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 112 | 2.75e-26 | NR | HOJ50042.1 | 2202144 | g18584 | i0 | 55.3 | 8.89473684210526 | 94 | 42 | 98.9 | 0 | 4 | 285 | 391 | 484 | HOJ50042.1 elongation factor G [Spirochaetota bacterium] | diamond | 2535 | 112 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium | ||||||
| 28831309 | 28831309 | PRJNA784298_P_NODE_18948_length_284_cov_1.554502_g18747_i0 | PRJNA784298 | 18948 | 284 | 1.554502 | 4.41478568 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 94 | 6.09e-20 | NR | WP_002770917.1 | 183 | g18747 | i0 | 48.9 | 4.75352112676056 | 94 | 48 | 99.3 | 0 | 282 | 1 | 537 | 630 | WP_002770917.1 ATP-binding protein [Leptonema illini] | diamond | 1350 | 94 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptonema | Leptonema illini | ||
| 29769255 | 29769255 | PRJNA784298_P_NODE_3871_length_647_cov_3.132404_g3674_i0 | PRJNA784298 | 3871 | 647 | 3.132404 | 20.26665388 | Leptospiraceae bacterium | 2026757 | Bacteria | Bacteria | 227 | 1.13e-72 | NR | MCB1176084.1 | 2026757 | g3674 | i0 | 68.8 | 0.714064914992272 | 154 | 48 | 71.4 | 0 | 26 | 487 | 1 | 154 | MCB1176084.1 hypothetical protein [Leptospiraceae bacterium] | diamond | 462 | 227 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 29927439 | 29927439 | PRJNA784298_P_NODE_2511_length_804_cov_3.314637_g2328_i0 | PRJNA784298 | 2511 | 804 | 3.314637 | 26.64968148 | Sphaerochaeta sp. | 1972642 | Bacteria | Bacteria | 85.9 | 5.03e-15 | NR | MFA5699261.1 | 1972642 | g2328 | i0 | 30.5 | 0.794776119402985 | 213 | 132 | 79.1 | 8 | 638 | 3 | 5 | 202 | MFA5699261.1 hypothetical protein [Sphaerochaeta sp.] | diamond | 639 | 85.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta sp. | ||
| 31199931 | 31199931 | PRJNA784298_P_NODE_14095_length_332_cov_2.351351_g13894_i0 | PRJNA784298 | 14095 | 332 | 2.351351 | 7.80648532 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 163 | 3.0699999999999997e-48 | NR | MCB1176082.1 | 2026757 | g13894 | i0 | 70.6 | 1.96987951807229 | 109 | 32 | 98.5 | 0 | 332 | 6 | 73 | 181 | MCB1176082.1 hypothetical protein [Leptospiraceae bacterium] | diamond | 654 | 164 | 0.99390243902439 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospiraceae bacterium | |||
| 31602399 | 31602399 | PRJNA784298_P_NODE_12856_length_348_cov_1.680000_g12655_i0 | PRJNA784298 | 12856 | 348 | 1.68 | 5.8464 | Leptospira | 171 | Bacteria | Bacteria | 78.6 | 6.96e-16 | NR | WP_026131249.1 | 171 | g12655 | i0 | 41.4 | 0.75 | 87 | 51 | 75 | 0 | 348 | 88 | 40 | 126 | WP_026131249.1 MULTISPECIES: DUF6258 family protein [Leptospira] | diamond | 261 | 78.6 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;