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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA784298" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA784298 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27274927 27274927 PRJNA784298_P_NODE_19843_length_277_cov_2.264706_g19642_i0 PRJNA784298 19843 277 2.264706 6.27323562 Polyangiales bacterium 3034171 Bacteria Bacteria 47.8 2.29e-4   NR MEZ4411320.1 3034171 g19642 i0 53.3 1.31046931407942 45 21 48.7 0 5 139 23 67 MEZ4411320.1 type IV pili twitching motility protein PilT [Polyangiales bacterium] diamond 363 47.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
27748891 27748891 PRJNA784298_P_NODE_7824_length_450_cov_2.538462_g7623_i0 PRJNA784298 7824 450 2.538462 11.423079 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 64.7 6.87e-9   NR TNF00116.1 2026735 g7623 i0 66 0.626666666666667 47 16 31.3 0 2 142 248 294 TNF00116.1 MAG: hypothetical protein EP326_06965, partial [Deltaproteobacteria bacterium] diamond 282 64.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28443447 28443447 PRJNA784298_P_NODE_2826_length_759_cov_3.548105_g2640_i0 PRJNA784298 2826 759 3.548105 26.93011695 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 179 9.179999999999999e-48   NR MBL4818683.1 2026735 g2640 i0 47.8 0.968379446640316 245 122 95.3 4 757 35 269 511 MBL4818683.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 735 179 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28948672 28948672 PRJNA784298_P_NODE_4548_length_597_cov_2.045802_g4350_i0 PRJNA784298 4548 597 2.045802 12.21343794 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 62 1.63e-7   NR MCX5855004.1 2026735 g4350 i0 38.6 0.442211055276382 88 50 42.2 1 321 572 144 231 MCX5855004.1 sensor domain-containing diguanylate cyclase [Deltaproteobacteria bacterium] diamond 264 62 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29358965 29358965 PRJNA784298_P_NODE_4869_length_576_cov_2.805169_g4670_i0 PRJNA784298 4869 576 2.805169 16.15777344 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 109 7.97e-24   NR MBL4818683.1 2026735 g4670 i0 43.8 1.01041666666667 194 106 100 2 576 1 526 718 MBL4818683.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 582 109 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29390596 29390596 PRJNA784298_P_NODE_18649_length_286_cov_2.854460_g18448_i0 PRJNA784298 18649 286 2.85446 8.1637556 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 81.3 4.72e-17   NR RLC14517.1 2026735 g18448 i0 54 0.660839160839161 63 29 66.1 0 285 97 84 146 RLC14517.1 MAG: hypothetical protein DRI24_13345 [Deltaproteobacteria bacterium] diamond 189 81.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30053470 30053470 PRJNA784298_P_NODE_13171_length_344_cov_2.070111_g12970_i0 PRJNA784298 13171 344 2.070111 7.12118184 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 72.4 4.27e-12   NR MCL5885335.1 2026735 g12970 i0 67.2 0.505813953488372 58 19 50.6 0 171 344 1 58 MCL5885335.1 hemolysin family protein [Deltaproteobacteria bacterium] diamond 174 72.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30653823 30653823 PRJNA784298_P_NODE_9573_length_406_cov_3.651652_g9372_i0 PRJNA784298 9573 406 3.651652 14.82570712 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 44.7 0.0319   NR MBW2643474.1 2026735 g9372 i0 26.6 0.694581280788177 94 61 63.5 2 316 59 135 228 MBW2643474.1 sugar phosphate isomerase/epimerase [Deltaproteobacteria bacterium] diamond 282 44.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32203351 32203351 PRJNA784298_P_NODE_20538_length_272_cov_1.658291_g20337_i0 PRJNA784298 20538 272 1.658291 4.51055152 Polyangiales bacterium 3034171 Bacteria Bacteria 46.2 0.00291   NR HTU57712.1 3034171 g20337 i0 95.5 0.242647058823529 22 1 24.3 0 206 271 1 22 HTU57712.1 oxygenase MpaB family protein [Polyangiales bacterium] diamond 66 46.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;