RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA784298" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA784298 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21167908 21167908 PRJNA784298_P_NODE_24377_length_249_cov_0.875000_g24176_i0 PRJNA784298 24377 249 0.875 2.17875 Naganishia liquefaciens 104408 Fungi Fungi 162 4.18e-45   NR GHJ87065.1 104408 g24176 i0 100 1.93975903614458 80 0 96.4 0 249 10 390 469 GHJ87065.1 hypothetical protein NliqN6_3467 [Naganishia liquefaciens] diamond 483 162 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Naganishia Naganishia liquefaciens
31665410 31665410 PRJNA784298_P_NODE_24037_length_250_cov_0.870056_g23836_i0 PRJNA784298 24037 250 0.870056 2.17514 Atractiella rhizophila 1938712 Fungi Fungi 81.3 3.86e-16   NR KAH8916799.1 1938712 g23836 i0 58.6 0.84 70 29 84 0 210 1 81 150 KAH8916799.1 alpha/beta-hydrolase [Atractiella rhizophila] diamond 210 81.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Atractiellomycetes Atractiellales Hoehnelomycetaceae Atractiella Atractiella rhizophila
32086036 32086036 PRJNA784298_P_NODE_26458_length_242_cov_0.911243_g26257_i0 PRJNA784298 26458 242 0.911243 2.20520806 Pucciniales 5258 Fungi Fungi 123 4.739999999999999e-31   NR KAG0141300.1 708437 g26257 i0 68.8 3.94214876033058 80 25 99.2 0 2 241 170 249 KAG0141300.1 hypothetical protein CROQUDRAFT_664022 [Cronartium quercuum f. sp. fusiforme G11] diamond 954 123 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Coleosporiaceae Cronartium Cronartium quercuum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;