contig_metadata
15 rows where analysis = "diamond", bioproject = "PRJNA784298" and tax_clade = "PVC group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6317254 | 6317254 | PRJNA784298_P_NODE_24305_length_249_cov_0.875000_g24104_i0 | PRJNA784298 | 24305 | 249 | 0.875 | 2.17875 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 138 | 2.11e-40 | NR | MEW6156793.1 | 2026799 | g24104 | i0 | 87.7 | 5.27710843373494 | 73 | 9 | 88 | 0 | 219 | 1 | 1 | 73 | MEW6156793.1 co-chaperone GroES [Verrucomicrobiota bacterium] | diamond | 1314 | 138 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 17343608 | 17343608 | PRJNA784298_P_NODE_23774_length_251_cov_0.865169_g23573_i0 | PRJNA784298 | 23774 | 251 | 0.865169 | 2.17157419 | Opitutia bacterium | 2026771 | Bacteria | Bacteria | 87.4 | 7.81e-18 | NR | MBI3884161.1 | 2026771 | g23573 | i0 | 59 | 0.99203187250996006 | 83 | 29 | 99.2 | 2 | 249 | 1 | 146 | 223 | MBI3884161.1 U32 family peptidase [Opitutia bacterium] | diamond | 249 | 87.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium | ||||
| 27274923 | 27274923 | PRJNA784298_P_NODE_12923_length_347_cov_1.854015_g12722_i0 | PRJNA784298 | 12923 | 347 | 1.854015 | 6.43343205 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 132 | 1.96e-35 | NR | RYD62014.1 | 2026800 | g12722 | i0 | 55.3 | 1.96253602305476 | 114 | 48 | 98.6 | 1 | 4 | 345 | 5 | 115 | RYD62014.1 MAG: hypothetical protein EOP83_15680 [Verrucomicrobiaceae bacterium] | diamond | 681 | 132 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 27306634 | 27306634 | PRJNA784298_P_NODE_27923_length_228_cov_2.896774_g27722_i0 | PRJNA784298 | 27923 | 228 | 2.896774 | 6.60464472 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 86.3 | 7.58e-18 | NR | HKP04302.1 | 2201154 | g27722 | i0 | 54.7 | 2.96052631578947 | 75 | 34 | 98.7 | 0 | 2 | 226 | 155 | 229 | HKP04302.1 DUF2971 domain-containing protein [Chthoniobacterales bacterium] | diamond | 675 | 86.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 28294593 | 28294593 | PRJNA784298_P_NODE_16646_length_304_cov_1.744589_g16445_i0 | PRJNA784298 | 16646 | 304 | 1.744589 | 5.30355056 | PVC group | 1783257 | Bacteria | Bacteria | 66.6 | 3.14e-10 | NR | OGN56317.1 | 1797598 | g16445 | i0 | 47.5 | 2.40789473684211 | 61 | 32 | 60.2 | 0 | 189 | 7 | 100 | 160 | OGN56317.1 MAG: recombinase RecD [Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39] | diamond | 732 | 67 | 0.994029850746269 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39 | |||||
| 29011912 | 29011912 | PRJNA784298_P_NODE_23788_length_251_cov_0.865169_g23587_i0 | PRJNA784298 | 23788 | 251 | 0.865169 | 2.17157419 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 146 | 6.319999999999998e-42 | NR | RIK83425.1 | 2026780 | g23587 | i0 | 81.5 | 0.968127490039841 | 81 | 15 | 96.8 | 0 | 2 | 244 | 138 | 218 | RIK83425.1 MAG: lysine decarboxylase [Planctomycetota bacterium] | diamond | 243 | 146 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29021195 | 29021195 | PRJNA784298_P_NODE_24088_length_250_cov_0.870056_g23887_i0 | PRJNA784298 | 24088 | 250 | 0.870056 | 2.17514 | Bacteria | 2 | Bacteria | Bacteria | 156 | 8.02e-45 | NR | MBC8117164.1 | 2026779 | g23887 | i0 | 97.6 | 5.964 | 83 | 2 | 99.6 | 0 | 250 | 2 | 115 | 197 | MBC8117164.1 3-oxoacyl-ACP synthase III [Planctomycetaceae bacterium] | diamond | 1491 | 156 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 29043309 | 29043309 | PRJNA784298_P_NODE_16628_length_304_cov_2.359307_g16427_i0 | PRJNA784298 | 16628 | 304 | 2.359307 | 7.17229328 | Fuerstiella sp. | 1936112 | Bacteria | Bacteria | 45.8 | 0.00123 | NR | MDG1896833.1 | 1936112 | g16427 | i0 | 40.5 | 1.44078947368421 | 74 | 41 | 70.1 | 1 | 281 | 69 | 12 | 85 | MDG1896833.1 hypothetical protein [Fuerstiella sp.] | diamond | 438 | 45.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Fuerstiella | Fuerstiella sp. | |
| 29453259 | 29453259 | PRJNA784298_P_NODE_13030_length_346_cov_1.128205_g12829_i0 | PRJNA784298 | 13030 | 346 | 1.128205 | 3.9035893 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 45.4 | 0.0139 | NR | MEY3172301.1 | 2026780 | g12829 | i0 | 54.3 | 0.303468208092486 | 35 | 16 | 30.3 | 0 | 37 | 141 | 838 | 872 | MEY3172301.1 hypothetical protein [Planctomycetota bacterium] | diamond | 105 | 45.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29579666 | 29579666 | PRJNA784298_P_NODE_3110_length_723_cov_3.227692_g2921_i0 | PRJNA784298 | 3110 | 723 | 3.227692 | 23.33621316 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 277 | 3.73e-88 | NR | MEN6384997.1 | 2052180 | g2921 | i0 | 58.4 | 0.908713692946058 | 219 | 88 | 89.6 | 1 | 711 | 64 | 195 | 413 | MEN6384997.1 DUF2828 family protein [Phycisphaerales bacterium] | diamond | 657 | 277 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 30717019 | 30717019 | PRJNA784298_P_NODE_24014_length_250_cov_0.870056_g23813_i0 | PRJNA784298 | 24014 | 250 | 0.870056 | 2.17514 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 78.6 | 4.32e-15 | NR | MBX7120636.1 | 2006848 | g23813 | i0 | 47.7 | 1.032 | 86 | 40 | 99.6 | 2 | 2 | 250 | 43 | 126 | MBX7120636.1 alpha/beta hydrolase [Opitutaceae bacterium] | diamond | 258 | 78.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 31263644 | 31263644 | PRJNA784298_P_NODE_18515_length_287_cov_4.056075_g18314_i0 | PRJNA784298 | 18515 | 287 | 4.056075 | 11.64093525 | Bacteria | 2 | Bacteria | Bacteria | 71.6 | 4.43e-12 | NR | MBN8644055.1 | 2026780 | g18314 | i0 | 46.2 | 2.91637630662021 | 78 | 42 | 81.5 | 0 | 253 | 20 | 11 | 88 | MBN8644055.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Planctomycetota bacterium] | diamond | 837 | 71.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31791812 | 31791812 | PRJNA784298_P_NODE_23297_length_253_cov_1.711111_g23096_i0 | PRJNA784298 | 23297 | 253 | 1.711111 | 4.32911083 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 64.3 | 3.29e-10 | NR | WP_150107388.1 | 1032527 | g23096 | i0 | 53 | 0.782608695652174 | 66 | 30 | 78.3 | 1 | 199 | 2 | 71 | 135 | WP_150107388.1 hypothetical protein [Pedosphaera parvula] | diamond | 198 | 64.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 32013485 | 32013485 | PRJNA784298_P_NODE_22038_length_261_cov_4.563830_g21837_i0 | PRJNA784298 | 22038 | 261 | 4.56383 | 11.9115963 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 79.3 | 4e-17 | NR | NBB80421.1 | 2026799 | g21837 | i0 | 50 | 0.850574712643678 | 74 | 37 | 85.1 | 0 | 226 | 5 | 1 | 74 | NBB80421.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 222 | 79.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32677173 | 32677173 | PRJNA784298_P_NODE_16800_length_302_cov_2.816594_g16599_i0 | PRJNA784298 | 16800 | 302 | 2.816594 | 8.50611388 | Rubritalea sp. | 2109375 | Bacteria | Bacteria | 62.8 | 6.24e-9 | NR | MEZ7957371.1 | 2109375 | g16599 | i0 | 42.5 | 1.70860927152318 | 73 | 34 | 69.5 | 2 | 210 | 1 | 106 | 173 | MEZ7957371.1 DUF2971 domain-containing protein [Rubritalea sp.] | diamond | 516 | 62.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Rubritaleaceae | Rubritalea | Rubritalea sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;