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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA782551" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA782551 · 18 ✖

analysis 1

  • diamond · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13966566 13966566 PRJNA782551_P_NODE_9731_length_302_cov_1.200873_g9609_i0 PRJNA782551 9731 302 1.200873 3.62663646 Metazoa 33208 Chordata Chordata 159 7.07e-44   NR ETE73729.1 8665 g9609 i0 83.9 16.4205298013245 87 14 86.4 0 2 262 446 532 ETE73729.1 Aspartyl-tRNA synthetase, cytoplasmic, partial [Ophiophagus hannah] diamond 4959 160 0.99375 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Elapidae Ophiophagus Ophiophagus hannah
26619711 26619711 PRJNA782551_P_NODE_15181_length_254_cov_1.701657_g15059_i0 PRJNA782551 15181 254 1.701657 4.32220878 Passeriformes 9126 Chordata Chordata 50.4 8.42e-5   NR XP_014745843.1 9172 g15059 i0 45.1 3.34251968503937 51 28 60.2 0 154 2 1080 1130 XP_014745843.1 PREDICTED: intersectin-1 [Sturnus vulgaris] diamond 849 50.8 0.992125984251969 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Sturnidae Sturnus Sturnus vulgaris
27211431 27211431 PRJNA782551_P_NODE_12962_length_271_cov_1.555556_g12840_i0 PRJNA782551 12962 271 1.555556 4.21555676 Ovis ammon polii x Ovis aries 2918886 Chordata Chordata 59.7 2.75e-9   NR KAI4568487.1 2918886 g12840 i0 90.9 0.365313653136531 33 3 36.5 0 99 1 58 90 KAI4568487.1 hypothetical protein MJT46_008285 [Ovis ammon polii x Ovis aries] diamond 99 59.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis ammon polii x Ovis aries
27433088 27433088 PRJNA782551_P_NODE_24883_length_241_cov_0.916667_g24761_i0 PRJNA782551 24883 241 0.916667 2.20916747 Rousettus aegyptiacus 9407 Chordata Chordata 68.2 3.12e-12   NR KAF6441176.1 9407 g24761 i0 49.3 1.85477178423237 71 34 88.4 1 214 2 40 108 KAF6441176.1 hypothetical protein HJG63_012326 [Rousettus aegyptiacus] diamond 447 68.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Rousettus Rousettus aegyptiacus
27505499 27505499 PRJNA782551_P_NODE_21763_length_244_cov_0.900585_g21641_i0 PRJNA782551 21763 244 0.900585 2.1974274 Chordata 7711 Chordata Chordata 108 2.61e-25   NR XP_050749097.1 33616 g21641 i0 65.4 6.97131147540984 81 28 99.6 0 2 244 596 676 XP_050749097.1 heat shock protein HSP 90-beta isoform X2 [Gymnogyps californianus] diamond 1701 108 1 Eukaryota Opisthokonta Metazoa Chordata Aves Accipitriformes Cathartidae Gymnogyps Gymnogyps californianus
27780305 27780305 PRJNA782551_P_NODE_24084_length_242_cov_0.911243_g23962_i0 PRJNA782551 24084 242 0.911243 2.20520806 Mycteria americana 33587 Chordata Chordata 43.9 0.0134   NR KAK4830265.1 33587 g23962 i0 46 0.78099173553719 63 31 74.4 1 215 36 219 281 KAK4830265.1 hypothetical protein QYF61_009358 [Mycteria americana] diamond 189 43.9 1 Eukaryota Opisthokonta Metazoa Chordata Aves Ciconiiformes Ciconiidae Mycteria Mycteria americana
27843135 27843135 PRJNA782551_P_NODE_20524_length_246_cov_0.890173_g20402_i0 PRJNA782551 20524 246 0.890173 2.18982558 Grus japonensis 30415 Chordata Chordata 60.8 1.15e-8   NR GAB0186367.1 30415 g20402 i0 51.6 1.57317073170732 64 16 59.8 1 33 179 219 282 GAB0186367.1 mitochondrial enolase superfamily member 1 [Grus japonensis] diamond 387 60.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Gruiformes Gruidae Grus Grus japonensis
29358935 29358935 PRJNA782551_P_NODE_14269_length_261_cov_1.414894_g14147_i0 PRJNA782551 14269 261 1.414894 3.69287334 Muntiacus reevesi 9886 Chordata Chordata 46.2 0.00273   NR KAB0353587.1 9886 g14147 i0 66.7 0.413793103448276 36 12 41.4 0 109 216 356 391 KAB0353587.1 hypothetical protein FD755_023713, partial [Muntiacus reevesi] diamond 108 46.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Muntiacus Muntiacus reevesi
29421811 29421811 PRJNA782551_P_NODE_23789_length_242_cov_0.911243_g23667_i0 PRJNA782551 23789 242 0.911243 2.20520806 Manis javanica 9974 Chordata Chordata 69.7 3.53e-12   NR KAI5940395.1 9974 g23667 i0 61.8 0.84297520661157 68 21 79.3 3 1 192 161 227 KAI5940395.1 LINE-1 retrotransposable element ORF2 protein [Manis javanica] diamond 204 69.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Pholidota Manidae Manis Manis javanica
29484873 29484873 PRJNA782551_P_NODE_24070_length_242_cov_0.911243_g23948_i0 PRJNA782551 24070 242 0.911243 2.20520806 Muntiacus reevesi 9886 Chordata Chordata 54.3 3.02e-6   NR KAB0339383.1 9886 g23948 i0 41.3 3.14876033057851 92 39 96.7 3 3 236 403 493 KAB0339383.1 hypothetical protein FD755_024967 [Muntiacus reevesi] diamond 762 54.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Muntiacus Muntiacus reevesi
29769221 29769221 PRJNA782551_P_NODE_22151_length_244_cov_0.900585_g22029_i0 PRJNA782551 22151 244 0.900585 2.1974274 Muntiacus reevesi 9886 Chordata Chordata 48.9 2.53e-4   NR KAB0372535.1 9886 g22029 i0 88.5 0.319672131147541 26 3 32 0 244 167 34 59 KAB0372535.1 hypothetical protein FD755_016327, partial [Muntiacus reevesi] diamond 78 48.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Muntiacus Muntiacus reevesi
30148173 30148173 PRJNA782551_P_NODE_14452_length_260_cov_1.085561_g14330_i0 PRJNA782551 14452 260 1.085561 2.8224586 Bos javanicus 9906 Chordata Chordata 53.5 5.49e-6   NR XP_061237218.1 9906 g14330 i0 54.9 1.17692307692308 51 17 51.9 1 105 239 199 249 XP_061237218.1 uncharacterized protein LOC133227011 isoform X1 [Bos javanicus] diamond 306 53.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
30338411 30338411 PRJNA782551_P_NODE_19952_length_246_cov_0.890173_g19830_i0 PRJNA782551 19952 246 0.890173 2.18982558 Ovis aries 9940 Chordata Chordata 42.4 0.0486   NR XP_042094387.1 9940 g19830 i0 45.9 0.902439024390244 74 25 75.6 3 200 15 4 74 XP_042094387.1 methylated-DNA--protein-cysteine methyltransferase isoform X1 [Ovis aries] diamond 222 42.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
30852778 30852778 PRJNA782551_P_NODE_23334_length_242_cov_1.698225_g23212_i0 PRJNA782551 23334 242 1.698225 4.1097045 root 1 Root_unresolved Root_unresolved 116 1.8099999999999999e-28   NR XP_039272032.1 7725 g23212 i0 69.6 19.5867768595041 79 24 97.9 0 2 238 325 403 XP_039272032.1 ruvB-like 2 [Styela clava] diamond 4740 116 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Stolidobranchia Styelidae Styela Styela clava
31285795 31285795 PRJNA782551_P_NODE_24015_length_242_cov_0.911243_g23893_i0 PRJNA782551 24015 242 0.911243 2.20520806 Bos mutus 72004 Chordata Chordata 105 2.24e-24   NR MXQ94399.1 72004 g23893 i0 90.6 0.65702479338843 53 5 65.7 0 2 160 773 825 MXQ94399.1 hypothetical protein [Bos mutus] diamond 159 105 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
31760325 31760325 PRJNA782551_P_NODE_16757_length_250_cov_0.870056_g16635_i0 PRJNA782551 16757 250 0.870056 2.17514 Rousettus aegyptiacus 9407 Chordata Chordata 52.8 2.89e-6   NR KAF6422800.1 9407 g16635 i0 41.5 0.984 82 36 85.2 3 225 13 55 135 KAF6422800.1 hypothetical protein HJG63_008601 [Rousettus aegyptiacus] diamond 246 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Rousettus Rousettus aegyptiacus
32465935 32465935 PRJNA782551_P_NODE_17719_length_249_cov_0.875000_g17597_i0 PRJNA782551 17719 249 0.875 2.17875 Metazoa 33208 Chordata Chordata 130 7.56e-33   NR PIO29837.1 8400 g17597 i0 75.3 101.55421686747 81 20 97.6 0 3 245 631 711 PIO29837.1 hypothetical protein AB205_0009430, partial [Aquarana catesbeiana] diamond 25287 131 0.99236641221374 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Aquarana Aquarana catesbeiana
32708782 32708782 PRJNA782551_P_NODE_19560_length_247_cov_0.885057_g19438_i0 PRJNA782551 19560 247 0.885057 2.18609079 Ambystoma mexicanum 8296 Chordata Chordata 104 5.96e-25   NR XP_069463286.1 8296 g19438 i0 63.4 0.995951417004049 82 29 98.4 1 3 245 150 231 XP_069463286.1 deaminated glutathione amidase isoform X2 [Ambystoma mexicanum] diamond 246 104 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Caudata Ambystomatidae Ambystoma Ambystoma mexicanum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;