RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA782551" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA782551 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26832132 26832132 PRJNA782551_P_NODE_21061_length_245_cov_0.895349_g20939_i0 PRJNA782551 21061 245 0.895349 2.19360505 Malassezia globosa associated totivirus 1 3048756 Viruses Viruses 165 9.29e-46   NR CAI9858974.1 3048756 g20939 i0 97.5 0.991836734693878 81 2 99.2 0 243 1 483 563 CAI9858974.1 capsid protein [Malassezia globosa associated totivirus 1] diamond 243 165 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia globosa associated totivirus 1
27243223 27243223 PRJNA782551_P_NODE_14383_length_260_cov_1.647059_g14261_i0 PRJNA782551 14383 260 1.647059 4.2823534 Malassezia restricta virus MrV4 76775 Viruses Viruses 152 1.85e-40   NR QJA42332.1 2727863 g14261 i0 86 1.98461538461538 86 12 99.2 0 2 259 841 926 QJA42332.1 polyprotein [Malassezia restricta virus MrV40L] diamond 516 152 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
27780302 27780302 PRJNA782551_P_NODE_15684_length_251_cov_0.865169_g15562_i0 PRJNA782551 15684 251 0.865169 2.17157419 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 65.1 5.68e-10   NR AVM87439.1 3063761 g15562 i0 54.9 0.609561752988048 51 23 61 0 99 251 928 978 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 153 65.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;