RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA782551" and tax_kingdom = "Fusobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 9 ✖

bioproject 1

  • PRJNA782551 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22890131 22890131 PRJNA782551_P_NODE_17558_length_249_cov_0.875000_g17436_i0 PRJNA782551 17558 249 0.875 2.17875 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 99 3.799999999999999e-24   NR WP_047394524.1 1339239 g17436 i0 96.1 0.614457831325301 51 2 61.4 0 96 248 1 51 WP_047394524.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE [Cetobacterium sp. ZOR0034] diamond 153 99 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
26990105 26990105 PRJNA782551_P_NODE_25042_length_241_cov_0.916667_g24920_i0 PRJNA782551 25042 241 0.916667 2.20916747 unclassified Cetobacterium 2630983 Bacteria Bacteria 160 7.41e-45   NR WP_047384462.1 2630983 g24920 i0 100 0.995850622406639 80 0 99.6 0 1 240 255 334 WP_047384462.1 MULTISPECIES: Ppx/GppA family phosphatase [unclassified Cetobacterium] diamond 240 160 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
27085274 27085274 PRJNA782551_P_NODE_2262_length_647_cov_2.714286_g2144_i0 PRJNA782551 2262 647 2.714286 17.56143042 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 422 2.2899999999999998e-148   NR WP_047384900.1 1340502 g2144 i0 100 0.996908809891808 215 0 99.7 0 3 647 31 245 WP_047384900.1 hypothetical protein [Cetobacterium sp. ZWU0022] diamond 645 422 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
27401380 27401380 PRJNA782551_P_NODE_6723_length_359_cov_9.713287_g6601_i0 PRJNA782551 6723 359 9.713287 34.87070033 unclassified Cetobacterium 2630983 Bacteria Bacteria 109 3.55e-28   NR WP_047381601.1 2630983 g6601 i0 89.1 0.768802228412256 92 10 76.9 0 10 285 1 92 WP_047381601.1 MULTISPECIES: hypothetical protein [unclassified Cetobacterium] diamond 276 109 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
28316983 28316983 PRJNA782551_P_NODE_23886_length_242_cov_0.911243_g23764_i0 PRJNA782551 23886 242 0.911243 2.20520806 Leptotrichia sp. oral taxon 215 712359 Bacteria Bacteria 155 4.84e-44   NR WP_021766977.1 712359 g23764 i0 100 0.991735537190083 80 0 99.2 0 3 242 161 240 WP_021766977.1 FAD:protein FMN transferase [Leptotrichia sp. oral taxon 215] diamond 240 155 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 215
28980158 28980158 PRJNA782551_P_NODE_25008_length_241_cov_0.916667_g24886_i0 PRJNA782551 25008 241 0.916667 2.20916747 Leptotrichia sp. oral taxon 212 712357 Bacteria Bacteria 141 8.579999999999999e-37   NR WP_053393397.1 712357 g24886 i0 90 0.995850622406639 80 8 99.6 0 240 1 494 573 WP_053393397.1 translocation/assembly module TamB domain-containing protein [Leptotrichia sp. oral taxon 212] diamond 240 141 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 212
29327190 29327190 PRJNA782551_P_NODE_16169_length_251_cov_0.865169_g16047_i0 PRJNA782551 16169 251 0.865169 2.17157419 Cetobacterium somerae 188913 Bacteria Bacteria 148 1.0599999999999999e-42   NR WP_023049726.1 188913 g16047 i0 94.4 0.860557768924303 72 4 86.1 0 249 34 138 209 WP_023049726.1 flavin reductase family protein [Cetobacterium somerae] diamond 216 148 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
29769220 29769220 PRJNA782551_P_NODE_18051_length_249_cov_0.875000_g17929_i0 PRJNA782551 18051 249 0.875 2.17875 uncultured Leptotrichia sp. 159271 Bacteria Bacteria 148 4.72e-42   NR WP_299264898.1 159271 g17929 i0 96.3 0.987951807228916 82 3 98.8 0 247 2 178 259 WP_299264898.1 hypothetical protein [uncultured Leptotrichia sp.] diamond 246 148 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia uncultured Leptotrichia sp.
32393179 32393179 PRJNA782551_P_NODE_25259_length_232_cov_2.716981_g25137_i0 PRJNA782551 25259 232 2.716981 6.30339592 unclassified Cetobacterium 2630983 Bacteria Bacteria 147 7.88e-44   NR WP_047383851.1 2630983 g25137 i0 96.1 0.982758620689655 76 3 98.3 0 230 3 48 123 WP_047383851.1 MULTISPECIES: hypothetical protein [unclassified Cetobacterium] diamond 228 147 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;