RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA782551" and tax_clade = "Sar"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA782551 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17341808 17341808 PRJNA782551_P_NODE_13474_length_267_cov_1.396907_g13352_i0 PRJNA782551 13474 267 1.396907 3.72974169 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 136 1.31e-38   NR KRX03957.1 266149 g13352 i0 83.1 0.932584269662921 83 14 93.3 0 250 2 61 143 KRX03957.1 hypothetical protein PPERSA_12404 [Pseudocohnilembus persalinus] diamond 249 136 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
21614715 21614715 PRJNA782551_P_NODE_22697_length_243_cov_0.905882_g22575_i0 PRJNA782551 22697 243 0.905882 2.20129326 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 90.5 5.71e-19   NR CDW80370.1 5949 g22575 i0 71.2 5.16049382716049 59 17 72.8 0 6 182 796 854 CDW80370.1 elongation factor domain iv family protein [Stylonychia lemnae] diamond 1254 90.5 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
26642038 26642038 PRJNA782551_P_NODE_20581_length_246_cov_0.890173_g20459_i0 PRJNA782551 20581 246 0.890173 2.18982558 Paramecium octaurelia 43137 SAR_Eukaryotes SAR_Eukaryotes 70.1 4.05e-12   NR CAD8157626.1 43137 g20459 i0 48.1 4.89024390243902 81 42 98.8 0 2 244 149 229 CAD8157626.1 unnamed protein product [Paramecium octaurelia] diamond 1203 70.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium octaurelia
27622432 27622432 PRJNA782551_P_NODE_12984_length_271_cov_1.348485_g12862_i0 PRJNA782551 12984 271 1.348485 3.65439435 Polarella glacialis 89957 SAR_Eukaryotes SAR_Eukaryotes 89 2.98e-18   NR CAE8638714.1 89957 g12862 i0 54.3 0.774907749077491 70 30 75.3 1 270 67 869 938 CAE8638714.1 unnamed protein product [Polarella glacialis] diamond 210 89 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis
27695033 27695033 PRJNA782551_P_NODE_16824_length_250_cov_0.870056_g16702_i0 PRJNA782551 16824 250 0.870056 2.17514 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 103 3.0599999999999998e-24   NR CAI2374128.1 5936 g16702 i0 64.9 7.104 74 26 88.8 0 223 2 164 237 CAI2374128.1 unnamed protein product [Moneuplotes crassus] diamond 1776 103 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
28957913 28957913 PRJNA782551_P_NODE_22708_length_243_cov_0.905882_g22586_i0 PRJNA782551 22708 243 0.905882 2.20129326 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 82.8 2.69e-18   NR OMJ66491.1 5963 g22586 i0 69.8 1.97530864197531 53 16 65.4 0 240 82 62 114 OMJ66491.1 hypothetical protein SteCoe_36649 [Stentor coeruleus] diamond 480 82.8 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
30338409 30338409 PRJNA782551_P_NODE_16392_length_250_cov_1.740113_g16270_i0 PRJNA782551 16392 250 1.740113 4.3502825 Polarella glacialis 89957 SAR_Eukaryotes SAR_Eukaryotes 95.1 1.57e-20   NR CAK0859889.1 89957 g16270 i0 54.2 0.996 83 37 99.6 1 250 2 2051 2132 CAK0859889.1 unnamed protein product [Polarella glacialis] diamond 249 95.1 1 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis
31791782 31791782 PRJNA782551_P_NODE_15597_length_251_cov_1.668539_g15475_i0 PRJNA782551 15597 251 1.668539 4.18803289 Seminavis robusta 568900 SAR_Eukaryotes SAR_Eukaryotes 89 5.65e-19   NR CAB9519286.1 568900 g15475 i0 48.2 0.99203187250996006 83 43 99.2 0 1 249 163 245 CAB9519286.1 Carbonyl reductase [NADPH] 1 [Seminavis robusta] diamond 249 89 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Seminavis Seminavis robusta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;