RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA782551" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA782551 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27053676 27053676 PRJNA782551_P_NODE_17302_length_249_cov_1.750000_g17180_i0 PRJNA782551 17302 249 1.75 4.3575 Cyanobacteria bacterium UBA11049 2055787 Bacteria Bacteria 138 5.23e-39   NR HCF26164.1 2055787 g17180 i0 79 0.975903614457831 81 17 97.6 0 3 245 83 163 HCF26164.1 hypothetical protein [Cyanobacteria bacterium UBA11049] diamond 243 138 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteria bacterium UBA11049
32298586 32298586 PRJNA782551_P_NODE_10619_length_290_cov_1.092166_g10497_i0 PRJNA782551 10619 290 1.092166 3.1672814 Coleofasciculus chthonoplastes 64178 Bacteria Bacteria 43.1 0.0497   NR MEQ9355858.1 3069538 g10497 i0 47.2 0.372413793103448 36 19 37.2 0 53 160 257 292 MEQ9355858.1 amino acid adenylation domain-containing protein [Coleofasciculus chthonoplastes F2-STO-03] diamond 108 43.1 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Coleofasciculales Coleofasciculaceae Coleofasciculus Coleofasciculus chthonoplastes
32330191 32330191 PRJNA782551_P_NODE_22599_length_243_cov_0.905882_g22477_i0 PRJNA782551 22599 243 0.905882 2.20129326 Chroococcidiopsis cubana 171392 Bacteria Bacteria 45.4 0.00397   NR WP_106168490.1 171392 g22477 i0 100 0.271604938271605 22 0 27.2 0 66 1 1 22 WP_106168490.1 helix-turn-helix domain-containing protein [Chroococcidiopsis cubana] diamond 66 45.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis Chroococcidiopsis cubana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;