contig_metadata
9 rows where analysis = "diamond", bioproject = "PRJNA782235" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4591713 | 4591713 | PRJNA782235_P_NODE_25404_length_243_cov_0.905882_g25215_i0 | PRJNA782235 | 25404 | 243 | 0.905882 | 2.20129326 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 151 | 1.75e-41 | NR | MEZ0311045.1 | 2818507 | g25215 | i0 | 97.5 | 1.97530864197531 | 80 | 2 | 98.8 | 0 | 241 | 2 | 131 | 210 | MEZ0311045.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [Myxococcota bacterium] | diamond | 480 | 151 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 21165974 | 21165974 | PRJNA782235_P_NODE_24137_length_244_cov_1.801170_g23948_i0 | PRJNA782235 | 24137 | 244 | 1.80117 | 4.3948548 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 133 | 2.4e-36 | NR | MFA6032311.1 | 2818507 | g23948 | i0 | 79 | 4.97950819672131 | 81 | 17 | 99.6 | 0 | 2 | 244 | 47 | 127 | MFA6032311.1 site-specific integrase [Myxococcota bacterium] | diamond | 1215 | 133 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 22440699 | 22440699 | PRJNA782235_P_NODE_21778_length_246_cov_1.780347_g21589_i0 | PRJNA782235 | 21778 | 246 | 1.780347 | 4.37965362 | Bacteria candidate phyla | 1783234 | Bacteria | Bacteria | 105 | 3.2299999999999997e-24 | NR | HTN83717.1 | 2093377 | g21589 | i0 | 67.5 | 3.90243902439024 | 77 | 25 | 93.9 | 0 | 233 | 3 | 1522 | 1598 | HTN83717.1 type I polyketide synthase [Sorangium sp.] | diamond | 960 | 106 | 0.990566037735849 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium sp. | |||
| 27874822 | 27874822 | PRJNA782235_P_NODE_10625_length_285_cov_1.452830_g10436_i0 | PRJNA782235 | 10625 | 285 | 1.45283 | 4.1405655 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 43.5 | 0.0227 | NR | GMV42276.1 | 2026763 | g10436 | i0 | 39.3 | 0.642105263157895 | 61 | 37 | 64.2 | 0 | 212 | 30 | 8 | 68 | GMV42276.1 MAG: hypothetical protein AMXMBFR64_39920 [Myxococcales bacterium] | diamond | 183 | 43.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 29642687 | 29642687 | PRJNA782235_P_NODE_27570_length_241_cov_1.291667_g27381_i0 | PRJNA782235 | 27570 | 241 | 1.291667 | 3.11291747 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 42.4 | 0.0464 | NR | MBN1226214.1 | 2026735 | g27381 | i0 | 34.6 | 0.647302904564315 | 52 | 32 | 62.2 | 1 | 218 | 69 | 184 | 235 | MBN1226214.1 TAXI family TRAP transporter solute-binding subunit [Deltaproteobacteria bacterium] | diamond | 156 | 42.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30211395 | 30211395 | PRJNA782235_P_NODE_25472_length_243_cov_0.905882_g25283_i0 | PRJNA782235 | 25472 | 243 | 0.905882 | 2.20129326 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 141 | 2.1399999999999996e-37 | NR | MFN0247680.1 | 2212474 | g25283 | i0 | 87.8 | 1.80246913580247 | 74 | 9 | 91.4 | 0 | 241 | 20 | 45 | 118 | MFN0247680.1 class II glutamine amidotransferase [Kofleriaceae bacterium] | diamond | 438 | 141 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 30811848 | 30811848 | PRJNA782235_P_NODE_15814_length_253_cov_1.355556_g15625_i0 | PRJNA782235 | 15814 | 253 | 1.355556 | 3.42955668 | Myxococcus vastator | 2709664 | Bacteria | Bacteria | 56.6 | 3.86e-7 | NR | WP_163778624.1 | 2709664 | g15625 | i0 | 44.2 | 1.82608695652174 | 77 | 41 | 91.3 | 2 | 252 | 22 | 37 | 111 | WP_163778624.1 endonuclease/exonuclease/phosphatase family protein [Myxococcus vastator] | diamond | 462 | 56.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus vastator | ||
| 31570783 | 31570783 | PRJNA782235_P_NODE_19336_length_249_cov_0.875000_g19147_i0 | PRJNA782235 | 19336 | 249 | 0.875 | 2.17875 | Anaeromyxobacteraceae bacterium | 2510643 | Bacteria | Bacteria | 119 | 4.489999999999999e-31 | NR | HZZ84940.1 | 2510643 | g19147 | i0 | 70.6 | 2.03614457831325 | 85 | 21 | 97.6 | 1 | 6 | 248 | 131 | 215 | HZZ84940.1 outer membrane beta-barrel domain-containing protein [Anaeromyxobacteraceae bacterium] | diamond | 507 | 119 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacteraceae bacterium | |||
| 32266805 | 32266805 | PRJNA782235_P_NODE_23138_length_245_cov_0.895349_g22949_i0 | PRJNA782235 | 23138 | 245 | 0.895349 | 2.19360505 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 85.9 | 1.9e-18 | NR | MFN7698519.1 | 2026735 | g22949 | i0 | 55.1 | 1.91020408163265 | 78 | 35 | 95.5 | 0 | 238 | 5 | 11 | 88 | MFN7698519.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 468 | 85.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;