RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA782235" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA782235 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
763328 763328 PRJNA782235_P_NODE_21641_length_247_cov_0.885057_g21452_i0 PRJNA782235 21641 247 0.885057 2.18609079 Bacteria 2 Bacteria Bacteria 149 1.37e-39   NR MBC7546307.1 2026720 g21452 i0 95.1 14.9392712550607 82 4 99.6 0 1 246 530 611 MBC7546307.1 DNA translocase FtsK 4TM domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 3690 149 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
16065890 16065890 PRJNA782235_P_NODE_28073_length_241_cov_0.916667_g27884_i0 PRJNA782235 28073 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 144 1.13e-38   NR OJU88065.1 1895829 g27884 i0 88.6 2.95020746887967 79 9 98.3 0 241 5 171 249 OJU88065.1 MAG: hypothetical protein BGO17_03765 [Candidatus Saccharibacteria bacterium 49-20] diamond 711 145 0.993103448275862 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20
28569433 28569433 PRJNA782235_P_NODE_22707_length_246_cov_0.890173_g22518_i0 PRJNA782235 22707 246 0.890173 2.18982558 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 110 2.8e-26   NR PID31564.1 2026720 g22518 i0 58.5 2.95121951219512 82 34 100 0 246 1 79 160 PID31564.1 MAG: hypothetical protein CR983_00585 [Candidatus Saccharibacteria bacterium] diamond 726 110 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28853464 28853464 PRJNA782235_P_NODE_10088_length_289_cov_1.236111_g9899_i0 PRJNA782235 10088 289 1.236111 3.57236079 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 55.8 1.5e-6   NR MEO5949122.1 1917697 g9899 i0 44.2 1.55709342560554 77 39 76.8 3 287 66 365 440 MEO5949122.1 DUF11 domain-containing protein [Candidatus Saccharimonas sp.] diamond 450 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
32488229 32488229 PRJNA782235_P_NODE_19639_length_248_cov_0.880000_g19450_i0 PRJNA782235 19639 248 0.88 2.1824 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 46.2 0.00215   NR HMI09658.1 2973664 g19450 i0 50.9 0.641129032258065 53 22 64.1 2 161 3 3 51 HMI09658.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 159 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;