RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA782235" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA782235 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14791806 14791806 PRJNA782235_P_NODE_10432_length_286_cov_2.892019_g10243_i0 PRJNA782235 10432 286 2.892019 8.27117434 Dicistroviridae sp. 1955144 Viruses Viruses 165 1.61e-46   NR QGW36120.1 1955144 g10243 i0 84 3.86013986013986 94 15 98.6 0 284 3 173 266 QGW36120.1 structural protein, partial [Dicistroviridae sp.] diamond 1104 165 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
32171854 32171854 PRJNA782235_P_NODE_7578_length_326_cov_1.209486_g7389_i0 PRJNA782235 7578 326 1.209486 3.94292436 Totiviridae sp. 1955172 Viruses Viruses 115 2.3400000000000003e-27   NR WAK77449.1 1955172 g7389 i0 60 0.874233128834356 95 38 87.4 0 287 3 143 237 WAK77449.1 MAG: polyprotein, partial [Totiviridae sp.] diamond 285 115 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
32803238 32803238 PRJNA782235_P_NODE_15720_length_253_cov_2.533333_g15531_i0 PRJNA782235 15720 253 2.533333 6.40933249 Rhizopus microsporus virga-like virus 1 3156536 Viruses Viruses 43.9 0.0172   NR BFM51661.1 3156536 g15531 i0 30 0.948616600790514 80 53 93.7 2 17 253 202 279 BFM51661.1 RNA-dependent RNA polymerase [Rhizopus microsporus virga-like virus 1] diamond 240 43.9 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae   Rhizopus microsporus virga-like virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;