RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA781453" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA781453 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17789955 17789955 PRJNA781453_P_NODE_35114_length_248_cov_0.874286_g34999_i0 PRJNA781453 35114 248 0.874286 2.16822928 Mycoplasmatota bacterium 2231116 Bacteria Bacteria 161 3.33e-46   NR MCI6931842.1 2231116 g34999 i0 98.8 0.991935483870968 82 1 99.2 0 1 246 179 260 MCI6931842.1 IS1634 family transposase [Mycoplasmatota bacterium] diamond 246 161 1 Bacteria   Bacillati Mycoplasmatota         Mycoplasmatota bacterium
30716974 30716974 PRJNA781453_P_NODE_36214_length_246_cov_0.890173_g36099_i0 PRJNA781453 36214 246 0.890173 2.18982558 Mycoplasmatota bacterium 2231116 Bacteria Bacteria 140 6.929999999999999e-40   NR MCI5733354.1 2231116 g36099 i0 97.5 0.98780487804878 81 2 98.8 0 2 244 20 100 MCI5733354.1 Bax inhibitor-1/YccA family protein [Mycoplasmatota bacterium] diamond 243 140 1 Bacteria   Bacillati Mycoplasmatota         Mycoplasmatota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;