RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA781453" and tax_phylum = "Ctenophora"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ctenophora · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA781453 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8415371 8415371 PRJNA781453_P_NODE_17187_length_353_cov_0.992857_g17072_i0 PRJNA781453 17187 353 0.992857 3.50478521 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 172 5.76e-49   NR XP_063690654.1 2820187 g17072 i0 81.7 1.78470254957507 104 19 88.4 0 350 39 370 473 XP_063690654.1 elongation factor 1-alpha-like [Bolinopsis microptera] diamond 630 172 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
10966850 10966850 PRJNA781453_P_NODE_30909_length_256_cov_1.737705_g30794_i0 PRJNA781453 30909 256 1.737705 4.4485248 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 150 5.03e-45   NR XP_063688580.1 2820187 g30794 i0 90.5 0.984375 84 8 98.4 0 254 3 23 106 XP_063688580.1 small ribosomal subunit protein eS25-like [Bolinopsis microptera] diamond 252 150 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;