RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA781453" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA781453 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10966260 10966260 PRJNA781453_P_NODE_11749_length_433_cov_1.283333_g11635_i0 PRJNA781453 11749 433 1.283333 5.55683189 Gymnopus androsaceus JB14 1447944 Fungi Fungi 270 5.61e-81   NR KAE9397860.1 1447944 g11635 i0 100 1.99538106235566 144 0 99.8 0 1 432 1074 1217 KAE9397860.1 pre-mRNA splicing factor [Gymnopus androsaceus JB14] diamond 864 270 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Gymnopus Gymnopus androsaceus
28032901 28032901 PRJNA781453_P_NODE_9805_length_477_cov_1.633663_g9691_i0 PRJNA781453 9805 477 1.633663 7.79257251 Gymnopus androsaceus JB14 1447944 Fungi Fungi 276 5.209999999999999e-87   NR KAE9398844.1 1447944 g9691 i0 90.6 1 159 14 99.4 1 2 475 220 378 KAE9398844.1 hypothetical protein BT96DRAFT_920598 [Gymnopus androsaceus JB14] diamond 477 276 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Gymnopus Gymnopus androsaceus
29201138 29201138 PRJNA781453_P_NODE_13309_length_403_cov_2.393939_g13195_i0 PRJNA781453 13309 403 2.393939 9.64757417 Gymnopus androsaceus JB14 1447944 Fungi Fungi 277 1.59e-90   NR KAE9409971.1 1447944 g13195 i0 100 0.997518610421836 134 0 99.8 0 402 1 173 306 KAE9409971.1 hypothetical protein BT96DRAFT_462336 [Gymnopus androsaceus JB14] diamond 402 277 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Gymnopus Gymnopus androsaceus
29390562 29390562 PRJNA781453_P_NODE_27329_length_276_cov_1.630542_g27214_i0 PRJNA781453 27329 276 1.630542 4.50029592 Gymnopus androsaceus JB14 1447944 Fungi Fungi 120 2.54e-30   NR KAE9409971.1 1447944 g27214 i0 100 0.554347826086957 51 0 55.4 0 2 154 102 152 KAE9409971.1 hypothetical protein BT96DRAFT_462336 [Gymnopus androsaceus JB14] diamond 153 120 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Gymnopus Gymnopus androsaceus
29611144 29611144 PRJNA781453_P_NODE_28110_length_272_cov_1.115578_g27995_i0 PRJNA781453 28110 272 1.115578 3.03437216 Gymnopus androsaceus JB14 1447944 Fungi Fungi 172 1.26e-52   NR KAE9391144.1 1447944 g27995 i0 100 0.992647058823529 90 0 99.3 0 272 3 92 181 KAE9391144.1 hypothetical protein BT96DRAFT_959616 [Gymnopus androsaceus JB14] diamond 270 172 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Gymnopus Gymnopus androsaceus
30243290 30243290 PRJNA781453_P_NODE_15292_length_374_cov_1.750831_g15178_i0 PRJNA781453 15292 374 1.750831 6.54810794 Tilletiopsis washingtonensis 58919 Fungi Fungi 114 1.36e-28   NR XP_025596234.1 58919 g15178 i0 52.1 1.77272727272727 119 56 95.5 1 373 17 106 223 XP_025596234.1 hypothetical protein FA09DRAFT_340529 [Tilletiopsis washingtonensis] diamond 663 114 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales   Tilletiopsis Tilletiopsis washingtonensis
31602362 31602362 PRJNA781453_P_NODE_19496_length_331_cov_1.445736_g19381_i0 PRJNA781453 19496 331 1.445736 4.78538616 Gymnopus androsaceus JB14 1447944 Fungi Fungi 218 4.08e-63   NR KAE9397860.1 1447944 g19381 i0 100 62.2205438066465 107 0 97 0 9 329 955 1061 KAE9397860.1 pre-mRNA splicing factor [Gymnopus androsaceus JB14] diamond 20595 218 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Gymnopus Gymnopus androsaceus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;