RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA781427" and tax_phylum = "candidate division WOR-3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WOR-3 · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA781427 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28010711 28010711 PRJNA781427_P_NODE_96265_length_241_cov_0.916667_g95381_i0 PRJNA781427 96265 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 86.3 2.74e-18   NR KPK68123.1 1703780 g95381 i0 93.5 4.08298755186722 46 3 57.3 0 240 103 187 232 KPK68123.1 MAG: phosphate ABC transporter permease [candidate division WOR_3 bacterium SM23_60] diamond 984 87 0.991954022988506 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR_3 bacterium SM23_60
32424805 32424805 PRJNA781427_P_NODE_92939_length_243_cov_0.905882_g92055_i0 PRJNA781427 92939 243 0.905882 2.20129326 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 42.4 0.0495   NR MEO0070737.1 2052148 g92055 i0 47.9 0.592592592592593 48 23 58 2 27 167 172 218 MEO0070737.1 PorV/PorQ family protein [candidate division WOR-3 bacterium] diamond 144 42.4 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;