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contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJNA781427" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA781427 · 20 ✖

analysis 1

  • diamond · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16064050 16064050 PRJNA781427_P_NODE_76413_length_250_cov_0.870056_g75529_i0 PRJNA781427 76413 250 0.870056 2.17514 Bacteria 2 Bacteria Bacteria 161 1.6e-45   NR MFO1478303.1 2026799 g75529 i0 97.6 10.956 83 2 99.6 0 1 249 236 318 MFO1478303.1 sigma-54 dependent transcriptional regulator [Verrucomicrobiota bacterium] diamond 2739 161 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27157370 27157370 PRJNA781427_P_NODE_77622_length_250_cov_0.870056_g76738_i0 PRJNA781427 77622 250 0.870056 2.17514 Pseudomonadati 3379134 Bacteria Bacteria 125 2.3099999999999997e-31   NR MDP4643254.1 2026772 g76738 i0 67.9 3.024 84 26 99.6 1 1 249 379 462 MDP4643254.1 hypothetical protein [Opitutales bacterium] diamond 756 126 0.992063492063492 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
27938104 27938104 PRJNA781427_P_NODE_78825_length_249_cov_0.875000_g77941_i0 PRJNA781427 78825 249 0.875 2.17875 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 94 2.16e-22   NR MEX1110853.1 2201154 g77941 i0 100 0.578313253012048 48 0 57.8 0 1 144 91 138 MEX1110853.1 biopolymer transporter ExbD [Chthoniobacterales bacterium] diamond 144 94 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
27969539 27969539 PRJNA781427_P_NODE_77625_length_250_cov_0.870056_g76741_i0 PRJNA781427 77625 250 0.870056 2.17514 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 144 2.76e-41   NR HXC32960.1 2499141 g76741 i0 90.2 0.984 82 7 98.4 1 3 248 64 144 HXC32960.1 cytochrome c oxidase subunit 3 [Verrucomicrobiia bacterium] diamond 246 144 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
28601187 28601187 PRJNA781427_P_NODE_82807_length_247_cov_0.885057_g81923_i0 PRJNA781427 82807 247 0.885057 2.18609079 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 54.3 1.42e-7   NR MDA7648774.1 2562705 g81923 i0 52.5 0.48582995951417 40 19 48.6 0 240 121 28 67 MDA7648774.1 hypothetical protein [Akkermansiaceae bacterium] diamond 120 54.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
28664292 28664292 PRJNA781427_P_NODE_83047_length_247_cov_0.885057_g82163_i0 PRJNA781427 83047 247 0.885057 2.18609079 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 144 4.1e-40   NR HSH16017.1 2499141 g82163 i0 76.5 0.983805668016194 81 16 98.4 1 245 3 234 311 HSH16017.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 243 144 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
28695958 28695958 PRJNA781427_P_NODE_80647_length_248_cov_0.880000_g79763_i0 PRJNA781427 80647 248 0.88 2.1824 Candidatus Udaeobacter sp. 2665650 Bacteria Bacteria 100 2.57e-22   NR HWJ47637.1 2665650 g79763 i0 87.7 0.786290322580645 65 7 77.4 1 229 38 685 749 HWJ47637.1 response regulator [Candidatus Udaeobacter sp.] diamond 195 100 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Candidatus Udaeobacter Candidatus Udaeobacter sp.
28758866 28758866 PRJNA781427_P_NODE_75027_length_251_cov_0.865169_g74143_i0 PRJNA781427 75027 251 0.865169 2.17157419 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 183 2.82e-54   NR MEY3275544.1 2026799 g74143 i0 100 0.99203187250996006 83 0 99.2 0 2 250 317 399 MEY3275544.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 249 183 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29232684 29232684 PRJNA781427_P_NODE_77349_length_250_cov_0.870056_g76465_i0 PRJNA781427 77349 250 0.870056 2.17514 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 119 3.21e-30   NR MEI7733399.1 2026799 g76465 i0 70.4 0.972 81 24 97.2 0 7 249 103 183 MEI7733399.1 RHS repeat-associated core domain-containing protein [Verrucomicrobiota bacterium] diamond 243 119 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29295686 29295686 PRJNA781427_P_NODE_95469_length_241_cov_0.916667_g94585_i0 PRJNA781427 95469 241 0.916667 2.20916747 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 149 7.659999999999998e-41   NR HWY77892.1 2499141 g94585 i0 91.3 0.995850622406639 80 7 99.6 0 1 240 138 217 HWY77892.1 GldG family protein [Verrucomicrobiia bacterium] diamond 240 149 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
29358914 29358914 PRJNA781427_P_NODE_81729_length_248_cov_0.880000_g80845_i0 PRJNA781427 81729 248 0.88 2.1824 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 53.5 6.28e-6   NR HSY13264.1 2499141 g80845 i0 48.1 0.629032258064516 52 27 62.9 0 77 232 599 650 HSY13264.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 156 53.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
29421792 29421792 PRJNA781427_P_NODE_85729_length_246_cov_0.890173_g84845_i0 PRJNA781427 85729 246 0.890173 2.18982558 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 118 4.41e-31   NR MCB1208656.1 2026801 g84845 i0 69.9 2.02439024390244 83 23 98.8 1 2 244 88 170 MCB1208656.1 lysophospholipid acyltransferase family protein [Verrucomicrobiales bacterium] diamond 498 118 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
30179836 30179836 PRJNA781427_P_NODE_90612_length_244_cov_0.900585_g89728_i0 PRJNA781427 90612 244 0.900585 2.1974274 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 139 7.079999999999999e-37   NR MEN9675876.1 2026799 g89728 i0 79 1.99180327868852 81 17 99.6 0 243 1 223 303 MEN9675876.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 486 139 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30685370 30685370 PRJNA781427_P_NODE_83733_length_247_cov_0.885057_g82849_i0 PRJNA781427 83733 247 0.885057 2.18609079 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 127 1.1800000000000001e-36   NR HVU99849.1 2499141 g82849 i0 93.8 0.777327935222672 64 4 77.7 0 56 247 1 64 HVU99849.1 HipA N-terminal domain-containing protein [Verrucomicrobiia bacterium] diamond 192 127 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
30685380 30685380 PRJNA781427_P_NODE_93433_length_242_cov_0.911243_g92549_i0 PRJNA781427 93433 242 0.911243 2.20520806 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 111 1.17e-27   NR MDB6060589.1 2026800 g92549 i0 63.8 0.991735537190083 80 29 99.2 0 242 3 184 263 MDB6060589.1 AraC family transcriptional regulator [Verrucomicrobiaceae bacterium] diamond 240 111 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
30694788 30694788 PRJNA781427_P_NODE_85913_length_246_cov_0.890173_g85029_i0 PRJNA781427 85913 246 0.890173 2.18982558 Bacteria 2 Bacteria Bacteria 137 1.34e-36   NR MBW8865516.1 2026799 g85029 i0 81.5 9.78048780487805 81 15 98.8 0 2 244 120 200 MBW8865516.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 2406 137 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30780253 30780253 PRJNA781427_P_NODE_64594_length_275_cov_1.490099_g63710_i0 PRJNA781427 64594 275 1.490099 4.09777225 Prosthecobacter sp. 1965333 Bacteria Bacteria 104 2.95e-25   NR MCW0218216.1 1965333 g63710 i0 75.8 0.676363636363636 62 15 67.6 0 272 87 176 237 MCW0218216.1 LexA family transcriptional regulator [Prosthecobacter sp.] diamond 186 104 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
32108354 32108354 PRJNA781427_P_NODE_87998_length_245_cov_0.895349_g87114_i0 PRJNA781427 87998 245 0.895349 2.19360505 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 162 2.28e-47   NR MBV9732281.1 2026799 g87114 i0 95.1 2.96326530612245 81 4 99.2 0 243 1 125 205 MBV9732281.1 pyridoxal-phosphate dependent enzyme [Verrucomicrobiota bacterium] diamond 726 162 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32519952 32519952 PRJNA781427_P_NODE_92759_length_243_cov_0.905882_g91875_i0 PRJNA781427 92759 243 0.905882 2.20129326 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 109 1.3399999999999999e-25   NR RFC51989.1 2026799 g91875 i0 75.6 0.962962962962963 78 19 96.3 0 236 3 221 298 RFC51989.1 MAG: Uncharacterized conserved protein (DUF2075) [Verrucomicrobiota bacterium] diamond 234 109 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32645558 32645558 PRJNA781427_P_NODE_92320_length_243_cov_0.905882_g91436_i0 PRJNA781427 92320 243 0.905882 2.20129326 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 122 1.4799999999999998e-32   NR PYJ02970.1 2026799 g91436 i0 83.6 0.901234567901235 73 12 90.1 0 22 240 57 129 PYJ02970.1 MAG: hypothetical protein DME25_14135 [Verrucomicrobiota bacterium] diamond 219 122 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;