contig_metadata
8 rows where analysis = "diamond", bioproject = "PRJNA781427" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26619707 | 26619707 | PRJNA781427_P_NODE_86721_length_245_cov_1.720930_g85837_i0 | PRJNA781427 | 86721 | 245 | 1.72093 | 4.2162785 | Peronosporaceae | 4777 | SAR_Eukaryotes | SAR_Eukaryotes | 103 | 1.7e-23 | NR | KAG7389890.1 | 221518 | g85837 | i0 | 57 | 9.68571428571429 | 79 | 34 | 96.7 | 0 | 244 | 8 | 135 | 213 | KAG7389890.1 hypothetical protein PHYPSEUDO_009404 [Phytophthora pseudosyringae] | diamond | 2373 | 103 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora pseudosyringae | ||
| 26873356 | 26873356 | PRJNA781427_P_NODE_81541_length_248_cov_0.880000_g80657_i0 | PRJNA781427 | 81541 | 248 | 0.88 | 2.1824 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 47.8 | 5.51e-4 | NR | KAJ8552409.1 | 4785 | g80657 | i0 | 95 | 0.592741935483871 | 20 | 1 | 24.2 | 0 | 61 | 2 | 181 | 200 | KAJ8552409.1 hypothetical protein ON010_g10137 [Phytophthora cinnamomi] | diamond | 147 | 47.8 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 27717385 | 27717385 | PRJNA781427_P_NODE_75244_length_251_cov_0.865169_g74360_i0 | PRJNA781427 | 75244 | 251 | 0.865169 | 2.17157419 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 78.2 | 9.63e-15 | NR | KAJ8576473.1 | 4785 | g74360 | i0 | 90.5 | 0.50199203187251 | 42 | 4 | 50.2 | 0 | 110 | 235 | 1 | 42 | KAJ8576473.1 hypothetical protein ON010_g2739 [Phytophthora cinnamomi] | diamond | 126 | 78.2 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 29210440 | 29210440 | PRJNA781427_P_NODE_75769_length_251_cov_0.865169_g74885_i0 | PRJNA781427 | 75769 | 251 | 0.865169 | 2.17157419 | Oomycota | 4762 | SAR_Eukaryotes | SAR_Eukaryotes | 55.1 | 1.5e-6 | NR | DAZ99778.1 | 4803 | g74885 | i0 | 50.9 | 3.72908366533865 | 57 | 24 | 68.1 | 1 | 76 | 246 | 25 | 77 | DAZ99778.1 TPA: hypothetical protein N0F65_001287, partial [Lagenidium giganteum] | diamond | 936 | 55.1 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Lagenidium | Lagenidium giganteum | ||
| 29579577 | 29579577 | PRJNA781427_P_NODE_21630_length_518_cov_1.006742_g20755_i0 | PRJNA781427 | 21630 | 518 | 1.006742 | 5.21492356 | Pythium insidiosum | 114742 | SAR_Eukaryotes | SAR_Eukaryotes | 73.2 | 1.89e-12 | NR | GLD92146.1 | 114742 | g20755 | i0 | 33.1 | 2.92471042471042 | 163 | 76 | 94.4 | 4 | 490 | 2 | 1 | 130 | GLD92146.1 hypothetical protein PINS_up000679 [Pythium insidiosum] | diamond | 1515 | 73.2 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium insidiosum | ||
| 31042726 | 31042726 | PRJNA781427_P_NODE_84235_length_247_cov_0.885057_g83351_i0 | PRJNA781427 | 84235 | 247 | 0.885057 | 2.18609079 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 62.4 | 4.63e-9 | NR | KAF1334840.1 | 82926 | g83351 | i0 | 46.3 | 2.33198380566802 | 67 | 34 | 78.9 | 1 | 198 | 4 | 338 | 404 | KAF1334840.1 Rcc1 and btb domain-containing protein, partial [Globisporangium splendens] | diamond | 576 | 62.4 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | Globisporangium splendens | ||
| 32203274 | 32203274 | PRJNA781427_P_NODE_22658_length_503_cov_1.841860_g21779_i0 | PRJNA781427 | 22658 | 503 | 1.84186 | 9.2645558 | Phytophthora idaei | 53986 | SAR_Eukaryotes | SAR_Eukaryotes | 49.3 | 0.00153 | NR | KAG3079860.1 | 53986 | g21779 | i0 | 51 | 0.840954274353877 | 49 | 22 | 28 | 1 | 303 | 443 | 56 | 104 | KAG3079860.1 hypothetical protein PI125_g20606 [Phytophthora idaei] | diamond | 423 | 49.3 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora idaei | ||
| 32551601 | 32551601 | PRJNA781427_P_NODE_80119_length_249_cov_0.875000_g79235_i0 | PRJNA781427 | 80119 | 249 | 0.875 | 2.17875 | Phytophthora lilii | 2077276 | SAR_Eukaryotes | SAR_Eukaryotes | 73.9 | 4.02e-13 | NR | GMF13333.1 | 2077276 | g79235 | i0 | 54.5 | 2.40963855421687 | 66 | 30 | 79.5 | 0 | 50 | 247 | 302 | 367 | GMF13333.1 unnamed protein product [Phytophthora lilii] | diamond | 600 | 73.9 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora lilii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;