RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA781427" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA781427 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28673585 28673585 PRJNA781427_P_NODE_16527_length_614_cov_5.120148_g15684_i0 PRJNA781427 16527 614 5.120148 31.43770872 Pseudomonadati 3379134 Bacteria Bacteria 101 2.38e-23   NR MBO8152607.1 2026760 g15684 i0 46.7 3.14169381107492 105 56 51.3 0 337 23 35 139 MBO8152607.1 Hsp20/alpha crystallin family protein [Fidelibacterota bacterium] diamond 1929 101 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29579609 29579609 PRJNA781427_P_NODE_92190_length_243_cov_0.905882_g91306_i0 PRJNA781427 92190 243 0.905882 2.20129326 Fidelibacterota bacterium 2026760 Bacteria Bacteria 52.8 4.64e-7   NR MCK4297810.1 2026760 g91306 i0 100 0.54320987654321 22 0 27.2 0 67 2 1 22 MCK4297810.1 YfhL family 4Fe-4S dicluster ferredoxin [Fidelibacterota bacterium] diamond 132 52.8 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;