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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA781427" and tax_phylum = "Atribacterota"

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tax_superkingdom 1

tax_phylum 1

  • Atribacterota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA781427 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
761940 761940 PRJNA781427_P_NODE_91981_length_243_cov_0.905882_g91097_i0 PRJNA781427 91981 243 0.905882 2.20129326 Candidatus Atribacteria bacterium 4572_76 1972458 Bacteria Bacteria 105 3.949999999999999e-24   NR OQY41221.1 1972458 g91097 i0 96.2 3.85185185185185 52 2 64.2 0 241 86 573 624 OQY41221.1 MAG: tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG [Candidatus Atribacteria bacterium 4572_76] diamond 936 105 1 Bacteria   Pseudomonadati Atribacterota         Candidatus Atribacteria bacterium 4572_76
7139534 7139534 PRJNA781427_P_NODE_54066_length_305_cov_1.125000_g53183_i0 PRJNA781427 54066 305 1.125 3.43125 Candidatus Phoenicimicrobium 3240460 Bacteria Bacteria 209 2.93e-65   NR PKP59992.1 2013676 g53183 i0 97 2.98032786885246 101 3 99.3 0 303 1 105 205 PKP59992.1 MAG: pyruvate ferredoxin oxidoreductase [Candidatus Atribacteria bacterium HGW-Atribacteria-1] diamond 909 209 1 Bacteria   Pseudomonadati Atribacterota         Candidatus Atribacteria bacterium HGW-Atribacteria-1
28253680 28253680 PRJNA781427_P_NODE_77906_length_250_cov_0.870056_g77022_i0 PRJNA781427 77906 250 0.870056 2.17514 Candidatus Atribacteria bacterium 2053509 Bacteria Bacteria 153 5.3499999999999997e-42   NR HAJ32676.1 2053509 g77022 i0 95.1 0.984 82 4 98.4 0 248 3 426 507 HAJ32676.1 carbon starvation protein A [Candidatus Atribacteria bacterium] diamond 246 153 1 Bacteria   Pseudomonadati Atribacterota Atribacteria       Candidatus Atribacteria bacterium
28727400 28727400 PRJNA781427_P_NODE_89947_length_244_cov_0.900585_g89063_i0 PRJNA781427 89947 244 0.900585 2.1974274 Candidatus Atribacteria bacterium 2053509 Bacteria Bacteria 160 4.01e-46   NR MCK4240795.1 2053509 g89063 i0 91.3 3.9344262295082 80 7 98.4 0 3 242 193 272 MCK4240795.1 hypothetical protein [Candidatus Atribacteria bacterium] diamond 960 160 1 Bacteria   Pseudomonadati Atribacterota Atribacteria       Candidatus Atribacteria bacterium
29715143 29715143 PRJNA781427_P_NODE_82070_length_248_cov_0.880000_g81186_i0 PRJNA781427 82070 248 0.88 2.1824 Bacteria 2 Bacteria Bacteria 103 3.2199999999999993e-24   NR TFG90588.1 2053509 g81186 i0 89.5 3.3991935483871 57 6 69 0 246 76 276 332 TFG90588.1 MAG: xanthine dehydrogenase family protein molybdopterin-binding subunit [Candidatus Atribacteria bacterium] diamond 843 103 1 Bacteria   Pseudomonadati Atribacterota Atribacteria       Candidatus Atribacteria bacterium
31105428 31105428 PRJNA781427_P_NODE_97195_length_241_cov_0.869048_g96311_i0 PRJNA781427 97195 241 0.869048 2.09440568 Bacteria 2 Bacteria Bacteria 47 0.00101   NR OQY38515.1 1972458 g96311 i0 91.7 0.871369294605809 24 2 29.9 0 239 168 247 270 OQY38515.1 MAG: hypothetical protein B6228_04425 [Candidatus Atribacteria bacterium 4572_76] diamond 210 47 1 Bacteria   Pseudomonadati Atribacterota         Candidatus Atribacteria bacterium 4572_76
31127452 31127452 PRJNA781427_P_NODE_87955_length_245_cov_0.895349_g87071_i0 PRJNA781427 87955 245 0.895349 2.19360505 Atribacterota bacterium 2952890 Bacteria Bacteria 144 1.71e-38   NR HZK10950.1 2952890 g87071 i0 87.5 1.95918367346939 80 10 98 0 241 2 369 448 HZK10950.1 ATP-binding protein [Atribacterota bacterium] diamond 480 144 1 Bacteria   Pseudomonadati Atribacterota         Atribacterota bacterium
31981683 31981683 PRJNA781427_P_NODE_77518_length_250_cov_0.870056_g76634_i0 PRJNA781427 77518 250 0.870056 2.17514 Candidatus Atribacteria bacterium 2053509 Bacteria Bacteria 129 7.17e-34   NR HAJ33222.1 2053509 g76634 i0 81.9 1.992 83 15 99.6 0 2 250 126 208 HAJ33222.1 sugar ABC transporter permease [Candidatus Atribacteria bacterium] diamond 498 129 1 Bacteria   Pseudomonadati Atribacterota Atribacteria       Candidatus Atribacteria bacterium
32171829 32171829 PRJNA781427_P_NODE_76838_length_250_cov_0.870056_g75954_i0 PRJNA781427 76838 250 0.870056 2.17514 Candidatus Atribacteria bacterium HGW-Atribacteria-1 2013676 Bacteria Bacteria 168 2.79e-49   NR PKP58754.1 2013676 g75954 i0 100 0.996 83 0 99.6 0 2 250 33 115 PKP58754.1 MAG: ABC transporter substrate-binding protein [Candidatus Atribacteria bacterium HGW-Atribacteria-1] diamond 249 168 1 Bacteria   Pseudomonadati Atribacterota         Candidatus Atribacteria bacterium HGW-Atribacteria-1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;