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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA781196" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA781196 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6315272 6315272 PRJNA781196_P_NODE_36725_length_293_cov_1.922727_g36348_i0 PRJNA781196 36725 293 1.922727 5.63359011 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 142 1.13e-38   NR XP_067197041.1 515981 g36348 i0 81.3 8.31399317406143 80 15 81.9 0 245 6 1 80 XP_067197041.1 uncharacterized protein FG386_000852 [Cryptosporidium ryanae] diamond 2436 143 0.993006993006993 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ryanae
16061796 16061796 PRJNA781196_P_NODE_37853_length_290_cov_1.009217_g37476_i0 PRJNA781196 37853 290 1.009217 2.9267293 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 115 8.49e-29   NR OEH73979.1 88456 g37476 i0 68.8 0.827586206896552 80 24 82.8 1 241 2 218 296 OEH73979.1 iron-sulfur subunit of succinate [Cyclospora cayetanensis] diamond 240 115 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
17337552 17337552 PRJNA781196_P_NODE_39794_length_283_cov_4.209524_g39417_i0 PRJNA781196 39794 283 4.209524 11.91295292 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 104 1.02e-26   NR XP_067802537.1 323732 g39417 i0 58.9 2.93639575971731 95 37 98.6 1 281 3 3 97 XP_067802537.1 Ribosomal protein S25 [Babesia duncani] diamond 831 104 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
19885744 19885744 PRJNA781196_P_NODE_11436_length_478_cov_3.320988_g11060_i0 PRJNA781196 11436 478 3.320988 15.87432264 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 258 3.08e-82   NR XP_003881929.1 572307 g11060 i0 80.5 6.7907949790795 154 30 96.7 0 16 477 12 165 XP_003881929.1 S-adenosylmethionine synthetase,related [Neospora caninum Liverpool] diamond 3246 259 0.996138996138996 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
21613564 21613564 PRJNA781196_P_NODE_65277_length_243_cov_0.917647_g64900_i0 PRJNA781196 65277 243 0.917647 2.22988221 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 137 8.629999999999999e-37   NR XP_003881929.1 572307 g64900 i0 82.9 24.8024691358025 76 13 93.8 0 228 1 12 87 XP_003881929.1 S-adenosylmethionine synthetase,related [Neospora caninum Liverpool] diamond 6027 137 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
27315950 27315950 PRJNA781196_P_NODE_53943_length_251_cov_0.876404_g53566_i0 PRJNA781196 53943 251 0.876404 2.19977404 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 140 2.95e-40   NR AET50562.1 5802 g53566 i0 76.8 6.8605577689243 82 19 98 0 251 6 78 159 AET50562.1 hypothetical protein [Eimeria tenella] diamond 1722 140 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
27663288 27663288 PRJNA781196_P_NODE_29764_length_321_cov_1.572581_g29387_i0 PRJNA781196 29764 321 1.572581 5.04798501 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 66.6 3.78e-10   NR CDI74584.1 51316 g29387 i0 40 4.31775700934579 90 48 84.1 2 27 296 163 246 CDI74584.1 thioredoxin, putative [Eimeria praecox] diamond 1386 67 0.994029850746269 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria praecox
28862832 28862832 PRJNA781196_P_NODE_64008_length_244_cov_0.912281_g63631_i0 PRJNA781196 64008 244 0.912281 2.22596564 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 56.2 6.62e-7   NR XP_034422903.1 5823 g63631 i0 32.1 3.98360655737705 81 49 99.6 1 1 243 344 418 XP_034422903.1 plasmepsin X, putative [Plasmodium berghei ANKA] diamond 972 56.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
29611077 29611077 PRJNA781196_P_NODE_64950_length_243_cov_0.917647_g64573_i0 PRJNA781196 64950 243 0.917647 2.22988221 Theileria equi strain WA 1537102 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.00263   NR XP_004828991.1 1537102 g64573 i0 30.9 1 81 55 100 1 243 1 149 228 XP_004828991.1 signal peptide-containing protein [Theileria equi strain WA] diamond 243 45.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
31706389 31706389 PRJNA781196_P_NODE_59257_length_247_cov_0.896552_g58880_i0 PRJNA781196 59257 247 0.896552 2.21448344 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0151   NR KOB87390.1 57267 g58880 i0 43.2 1.60323886639676 44 21 48.6 1 213 94 352 395 KOB87390.1 hypothetical protein PFDG_03457 [Plasmodium falciparum Dd2] diamond 396 43.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
32117776 32117776 PRJNA781196_P_NODE_26558_length_336_cov_1.779468_g26181_i0 PRJNA781196 26558 336 1.779468 5.97901248 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 81.3 3.66e-15   NR XP_028533357.1 85471 g26181 i0 53.5 12.4732142857143 86 36 73.2 2 255 10 2187 2272 XP_028533357.1 formin 1, putative [Plasmodium relictum] diamond 4191 81.6 0.996323529411765 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;