RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA781196" and tax_phylum = "Acidobacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJNA781196 · 14 ✖

analysis 1

  • diamond · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26673351 26673351 PRJNA781196_P_NODE_56441_length_249_cov_0.886364_g56064_i0 PRJNA781196 56441 249 0.886364 2.20704636 Acidobacteriota bacterium 1978231 Bacteria Bacteria 44.7 0.00816   NR MSO24005.1 1978231 g56064 i0 37.5 0.674698795180723 56 33 67.5 1 249 82 261 314 MSO24005.1 hypothetical protein [Acidobacteriota bacterium] diamond 168 44.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26863990 26863990 PRJNA781196_P_NODE_31161_length_315_cov_1.082645_g30784_i0 PRJNA781196 31161 315 1.082645 3.41033175 Terriglobia bacterium 2081523 Bacteria Bacteria 43.5 0.0423   NR MBZ5707060.1 2081523 g30784 i0 35.2 0.838095238095238 88 51 79 4 46 294 202 288 MBZ5707060.1 aminotransferase class IV [Terriglobia bacterium] diamond 264 43.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
27717316 27717316 PRJNA781196_P_NODE_38004_length_289_cov_1.444444_g37627_i0 PRJNA781196 38004 289 1.444444 4.17444316 Blastocatellia bacterium 2052146 Bacteria Bacteria 52.4 2.38e-5   NR HYE72208.1 2052146 g37627 i0 43.9 0.685121107266436 66 36 67.5 1 198 4 201 266 HYE72208.1 toll/interleukin-1 receptor domain-containing protein [Blastocatellia bacterium] diamond 198 52.4 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
27789562 27789562 PRJNA781196_P_NODE_59304_length_247_cov_0.896552_g58927_i0 PRJNA781196 59304 247 0.896552 2.21448344 Bacteria 2 Bacteria Bacteria 132 3.16e-36   NR MCZ6833345.1 1978231 g58927 i0 74.4 7.96761133603239 82 21 99.6 0 247 2 124 205 MCZ6833345.1 M20/M25/M40 family metallo-hydrolase [Acidobacteriota bacterium] diamond 1968 132 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27811824 27811824 PRJNA781196_P_NODE_26344_length_337_cov_2.363636_g25967_i0 PRJNA781196 26344 337 2.363636 7.96545332 Candidatus Polarisedimenticolia bacterium 3069555 Bacteria Bacteria 47.8 0.00178   NR HEV8200145.1 3069555 g25967 i0 62.9 0.311572700296736 35 9 31.2 2 240 136 255 285 HEV8200145.1 MopE-related protein [Candidatus Polarisedimenticolia bacterium] diamond 105 47.8 1 Bacteria   Pseudomonadati Acidobacteriota Candidatus Polarisedimenticolia       Candidatus Polarisedimenticolia bacterium
28285037 28285037 PRJNA781196_P_NODE_56226_length_249_cov_0.886364_g55849_i0 PRJNA781196 56226 249 0.886364 2.20704636 Terriglobales bacterium 2282142 Bacteria Bacteria 51.2 4.11e-5   NR HEU5403340.1 2282142 g55849 i0 37.5 0.963855421686747 80 49 96.4 1 3 242 619 697 HEU5403340.1 tetratricopeptide repeat protein [Terriglobales bacterium] diamond 240 51.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
28326041 28326041 PRJNA781196_P_NODE_26666_length_336_cov_1.171103_g26289_i0 PRJNA781196 26666 336 1.171103 3.93490608 Pseudomonadati 3379134 Bacteria Bacteria 105 7.52e-24   NR MBP1596909.1 1978231 g26289 i0 47.9 4.17857142857143 117 53 99.1 3 3 335 102 216 MBP1596909.1 dipeptidyl-peptidase [Acidobacteriota bacterium] diamond 1404 105 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29453151 29453151 PRJNA781196_P_NODE_44350_length_269_cov_1.193878_g43973_i0 PRJNA781196 44350 269 1.193878 3.21153182 Terriglobales bacterium 2282142 Bacteria Bacteria 42.7 0.0488   NR HKN72134.1 2282142 g43973 i0 38.8 0.546468401486989 49 30 54.6 0 242 96 310 358 HKN72134.1 hypothetical protein [Terriglobales bacterium] diamond 147 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
29832340 29832340 PRJNA781196_P_NODE_18871_length_386_cov_1.993610_g18494_i0 PRJNA781196 18871 386 1.99361 7.6953346 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 60.8 8.14e-8   NR HZF09337.1 2651171 g18494 i0 31.3 0.994818652849741 128 78 96.4 3 15 386 13 134 HZF09337.1 IPTL-CTERM sorting domain-containing protein [Thermoanaerobaculia bacterium] diamond 384 60.8 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
30062774 30062774 PRJNA781196_P_NODE_38231_length_288_cov_2.102326_g37854_i0 PRJNA781196 38231 288 2.102326 6.05469888 Acidobacteriota 57723 Bacteria Bacteria 154 2.11e-44   NR MEI9815000.1 1978231 g37854 i0 77.9 18.65625 95 21 99 0 3 287 161 255 MEI9815000.1 aldolase/citrate lyase family protein [Acidobacteriota bacterium] diamond 5373 155 0.993548387096774 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30716902 30716902 PRJNA781196_P_NODE_52514_length_251_cov_2.191011_g52137_i0 PRJNA781196 52514 251 2.191011 5.49943761 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 65.9 2.95e-10   NR HEY1499184.1 2052142 g52137 i0 40.6 1.51792828685259 69 41 82.5 0 207 1 501 569 HEY1499184.1 multicopper oxidase domain-containing protein [Acidobacteriaceae bacterium] diamond 381 65.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
30938372 30938372 PRJNA781196_P_NODE_66394_length_242_cov_0.923077_g66017_i0 PRJNA781196 66394 242 0.923077 2.23384634 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 60.8 7.8e-9   NR HTR04991.1 2651171 g66017 i0 40.5 0.91735537190082606 74 37 84.3 2 242 39 159 231 HTR04991.1 NAD(P)H-binding protein [Thermoanaerobaculia bacterium] diamond 222 60.8 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
31981598 31981598 PRJNA781196_P_NODE_38598_length_287_cov_1.803738_g38221_i0 PRJNA781196 38598 287 1.803738 5.17672806 Blastocatellia bacterium 2052146 Bacteria Bacteria 147 5.98e-41   NR HYE73377.1 2052146 g38221 i0 75.8 0.993031358885017 95 23 99.3 0 3 287 29 123 HYE73377.1 mevalonate kinase [Blastocatellia bacterium] diamond 285 147 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
32298474 32298474 PRJNA781196_P_NODE_20099_length_377_cov_1.246711_g19722_i0 PRJNA781196 20099 377 1.246711 4.70010047 Blastocatellia bacterium 2052146 Bacteria Bacteria 190 4.5399999999999995e-57   NR HYE73377.1 2052146 g19722 i0 74.4 0.994694960212202 125 32 99.5 0 1 375 127 251 HYE73377.1 mevalonate kinase [Blastocatellia bacterium] diamond 375 190 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;