RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA781196" and tax_kingdom = "Thermotogati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 4 ✖

bioproject 1

  • PRJNA781196 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28168394 28168394 PRJNA781196_P_NODE_53265_length_251_cov_0.876404_g52888_i0 PRJNA781196 53265 251 0.876404 2.19977404 Thermotogati 3384194 Bacteria Bacteria 54.7 3.38e-7   NR MBQ7155366.1 2053624 g52888 i0 43.2 6.800796812749 74 41 88.4 1 230 9 7 79 MBQ7155366.1 50S ribosomal protein L22 [Synergistaceae bacterium] diamond 1707 55.1 0.992740471869329 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
28601121 28601121 PRJNA781196_P_NODE_53167_length_251_cov_0.876404_g52790_i0 PRJNA781196 53167 251 0.876404 2.19977404 Deinococcus roseus 392414 Bacteria Bacteria 42.7 0.0381   NR WP_189002169.1 392414 g52790 i0 39.6 0.633466135458167 53 30 61 1 99 251 18 70 WP_189002169.1 leishmanolysin-related zinc metalloendopeptidase [Deinococcus roseus] diamond 159 42.7 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus roseus
32330105 32330105 PRJNA781196_P_NODE_52039_length_252_cov_0.871508_g51662_i0 PRJNA781196 52039 252 0.871508 2.19620016 Synergistota bacterium 2268202 Bacteria Bacteria 43.9 0.0169   NR MBC7332622.1 2268202 g51662 i0 35.1 0.916666666666667 77 48 91.7 1 240 10 377 451 MBC7332622.1 hypothetical protein [Synergistota bacterium] diamond 231 43.9 1 Bacteria   Thermotogati Synergistota         Synergistota bacterium
32488154 32488154 PRJNA781196_P_NODE_61419_length_245_cov_2.174419_g61042_i0 PRJNA781196 61419 245 2.174419 5.32732655 Calidithermus roseus 1644118 Bacteria Bacteria 42.4 0.0231   NR WP_119277648.1 1644118 g61042 i0 43.9 0.502040816326531 41 23 50.2 0 117 239 9 49 WP_119277648.1 hypothetical protein [Calidithermus roseus] diamond 123 42.4 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Calidithermus Calidithermus roseus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;