RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA774958" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA774958 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23705706 23705706 PRJNA774958_P_NODE_37199_length_244_cov_0.900585_g36952_i0 PRJNA774958 37199 244 0.900585 2.1974274 Acrasis kona 1008807 Heterolobosea other_Eukaryota 65.5 5.89e-11   NR KAL0482353.1 1008807 g36952 i0 44.8 5.5327868852459 67 37 82.4 0 4 204 105 171 KAL0482353.1 hypothetical protein AKO1_012959 [Acrasis kona] diamond 1350 65.5 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27780086 27780086 PRJNA774958_P_NODE_38584_length_242_cov_0.893491_g38337_i0 PRJNA774958 38584 242 0.893491 2.16224822 Acrasis kona 1008807 Heterolobosea other_Eukaryota 47 6.55e-4   NR KAL0479697.1 1008807 g38337 i0 37.7 0.65702479338843 53 33 65.7 0 174 16 59 111 KAL0479697.1 hypothetical protein AKO1_007521 [Acrasis kona] diamond 159 47 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28316780 28316780 PRJNA774958_P_NODE_38746_length_241_cov_1.089286_g38499_i0 PRJNA774958 38746 241 1.089286 2.62517926 Acrasis kona 1008807 Heterolobosea other_Eukaryota 72 1.58e-12   NR KAL0485092.1 1008807 g38499 i0 42.7 2.93775933609959 75 43 93.4 0 227 3 214 288 KAL0485092.1 peptide chain release factor 1 [Acrasis kona] diamond 708 72 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28862792 28862792 PRJNA774958_P_NODE_12548_length_460_cov_1.312661_g12301_i0 PRJNA774958 12548 460 1.312661 6.0382406 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 157 3.27e-43   NR XP_044566991.1 5763 g12301 i0 47.3 11.6739130434783 150 73 96.5 2 446 3 220 365 XP_044566991.1 uncharacterized protein FDP41_011208 [Naegleria fowleri] diamond 5370 158 0.993670886075949 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
30621983 30621983 PRJNA774958_P_NODE_34353_length_249_cov_0.875000_g34106_i0 PRJNA774958 34353 249 0.875 2.17875 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 147 1.18e-39   NR XP_002669731.1 5762 g34106 i0 90.1 1.95180722891566 81 8 97.6 0 5 247 382 462 XP_002669731.1 uncharacterized protein NAEGRDRAFT_54005 [Naegleria gruberi] diamond 486 147 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31295141 31295141 PRJNA774958_P_NODE_20155_length_355_cov_1.978723_g19908_i0 PRJNA774958 20155 355 1.978723 7.02446665 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 50.1 3.25e-4   NR XP_002669352.1 5762 g19908 i0 47.6 1.08169014084507 42 22 35.5 0 275 150 219 260 XP_002669352.1 uncharacterized protein NAEGRDRAFT_54270 [Naegleria gruberi] diamond 384 50.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;