RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA774958" and tax_phylum = "Actinomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Actinomycetota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA774958 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21610407 21610407 PRJNA774958_P_NODE_38217_length_242_cov_0.911243_g37970_i0 PRJNA774958 38217 242 0.911243 2.20520806 Acidimicrobiia bacterium 2080302 Bacteria Bacteria 145 2.63e-39   NR NNC92983.1 2080302 g37970 i0 92.5 2.97520661157025 80 6 99.2 0 241 2 263 342 NNC92983.1 NADH-quinone oxidoreductase subunit N [Acidimicrobiia bacterium] diamond 720 145 1 Bacteria   Bacillati Actinomycetota Acidimicrobiia       Acidimicrobiia bacterium
28664099 28664099 PRJNA774958_P_NODE_38987_length_241_cov_0.916667_g38740_i0 PRJNA774958 38987 241 0.916667 2.20916747 Agromyces sp. NBRC 114283 2994521 Bacteria Bacteria 135 9.04e-36   NR WP_285464103.1 2994521 g38740 i0 92.4 0.983402489626556 79 6 98.3 0 239 3 160 238 WP_285464103.1 alpha/beta hydrolase family protein [Agromyces sp. NBRC 114283] diamond 237 135 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Agromyces Agromyces sp. NBRC 114283
30716801 30716801 PRJNA774958_P_NODE_36974_length_244_cov_2.198830_g36727_i0 PRJNA774958 36974 244 2.19883 5.3651452 Streptomyces resistomycificus 67356 Bacteria Bacteria 41.2 0.0192   NR WP_030044973.1 67356 g36727 i0 38.1 0.774590163934426 63 38 76.2 1 54 239 5 67 WP_030044973.1 EF-hand domain-containing protein [Streptomyces resistomycificus] diamond 189 41.2 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces resistomycificus
30874834 30874834 PRJNA774958_P_NODE_25014_length_310_cov_0.974684_g24767_i0 PRJNA774958 25014 310 0.974684 3.0215204 Propionibacteriaceae bacterium 2021380 Bacteria Bacteria 76.3 5.86e-15   NR MCP3885490.1 2021380 g24767 i0 63.3 0.580645161290323 60 22 58.1 0 3 182 92 151 MCP3885490.1 translation initiation factor IF-5A [Propionibacteriaceae bacterium] diamond 180 76.3 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae   Propionibacteriaceae bacterium
31222201 31222201 PRJNA774958_P_NODE_18895_length_370_cov_0.993266_g18648_i0 PRJNA774958 18895 370 0.993266 3.6750842 Streptomyces sp. NPDC 1931 Bacteria Bacteria 46.2 0.00905   NR WP_384831232.1 3346694 g18648 i0 24.4 0.964864864864865 119 86 93.2 1 353 9 566 684 WP_384831232.1 hypothetical protein [Streptomyces sp. NPDC059009] diamond 357 46.2 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces sp. NPDC059009
31633523 31633523 PRJNA774958_P_NODE_19076_length_368_cov_1.044068_g18829_i0 PRJNA774958 19076 368 1.044068 3.84217024 Streptomyces purpurogeneiscleroticus 68259 Bacteria Bacteria 44.3 0.043   NR WP_223735224.1 68259 g18829 i0 34.8 0.5625 69 42 56.3 1 345 139 427 492 WP_223735224.1 hypothetical protein [Streptomyces purpurogeneiscleroticus] diamond 207 44.3 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces purpurogeneiscleroticus
32044924 32044924 PRJNA774958_P_NODE_38038_length_243_cov_0.823529_g37791_i0 PRJNA774958 38038 243 0.823529 2.00117547 Acidimicrobiales bacterium 2201156 Bacteria Bacteria 42.7 0.0357   NR HVC70596.1 2201156 g37791 i0 37.2 0.962962962962963 78 39 96.3 4 9 242 323 390 HVC70596.1 MFS transporter [Acidimicrobiales bacterium] diamond 234 42.7 1 Bacteria   Bacillati Actinomycetota Acidimicrobiia Acidimicrobiales     Acidimicrobiales bacterium
32266578 32266578 PRJNA774958_P_NODE_18198_length_378_cov_0.980328_g17951_i0 PRJNA774958 18198 378 0.980328 3.70563984 Actinomycetota bacterium 2900548 Bacteria Bacteria 86.3 6.84e-17   NR MEY3806157.1 2900548 g17951 i0 39 1.99206349206349 123 72 97.6 2 9 377 98 217 MEY3806157.1 molybdopterin biosynthesis protein MoeA [Actinomycetota bacterium] diamond 753 86.3 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;