contig_metadata
7 rows where analysis = "diamond", bioproject = "PRJNA774958" and tax_clade = "PVC group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9680959 | 9680959 | PRJNA774958_P_NODE_1368_length_1268_cov_4.610879_g1254_i0 | PRJNA774958 | 1368 | 1268 | 4.610879 | 58.46594572 | root | 1 | Root_unresolved | Root_unresolved | 505 | 4.379999999999999e-174 | NR | MBL8900762.1 | 2026780 | g1254 | i0 | 58.5 | 10.8430599369085 | 414 | 170 | 97.5 | 1 | 1245 | 10 | 46 | 459 | MBL8900762.1 adenosylhomocysteinase [Planctomycetota bacterium] | diamond | 13749 | 505 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 27085041 | 27085041 | PRJNA774958_P_NODE_28062_length_286_cov_1.323944_g27815_i0 | PRJNA774958 | 28062 | 286 | 1.323944 | 3.78647984 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 173 | 8.199999999999998e-53 | NR | RYD67753.1 | 2026800 | g27815 | i0 | 86.3 | 0.996503496503496 | 95 | 13 | 99.7 | 0 | 2 | 286 | 93 | 187 | RYD67753.1 MAG: hypothetical protein EOP83_02210 [Verrucomicrobiaceae bacterium] | diamond | 285 | 173 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 27600170 | 27600170 | PRJNA774958_P_NODE_23704_length_321_cov_1.020161_g23457_i0 | PRJNA774958 | 23704 | 321 | 1.020161 | 3.27471681 | root | 1 | Root_unresolved | Root_unresolved | 53.1 | 1.8e-5 | NR | MFA7345307.1 | 2832348 | g23457 | i0 | 44.3 | 1.22429906542056 | 70 | 38 | 65.4 | 1 | 101 | 310 | 20 | 88 | MFA7345307.1 2-enoyl thioester reductase domain-containing protein [Terrimicrobiaceae bacterium] | diamond | 393 | 53.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Terrimicrobiia | Terrimicrobiales | Terrimicrobiaceae | Terrimicrobiaceae bacterium | ||
| 29453030 | 29453030 | PRJNA774958_P_NODE_30110_length_272_cov_1.160804_g29863_i0 | PRJNA774958 | 30110 | 272 | 1.160804 | 3.15738688 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 165 | 6.229999999999999e-48 | NR | RYD65414.1 | 2026800 | g29863 | i0 | 81.1 | 0.992647058823529 | 90 | 17 | 99.3 | 0 | 2 | 271 | 234 | 323 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 270 | 165 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 30969819 | 30969819 | PRJNA774958_P_NODE_22434_length_332_cov_2.621622_g22187_i0 | PRJNA774958 | 22434 | 332 | 2.621622 | 8.70378504 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 47.4 | 0.00216 | NR | MBM4009064.1 | 2026780 | g22187 | i0 | 40.9 | 0.795180722891566 | 44 | 23 | 37 | 1 | 52 | 174 | 135 | 178 | MBM4009064.1 DMT family transporter [Planctomycetota bacterium] | diamond | 264 | 47.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31854949 | 31854949 | PRJNA774958_P_NODE_11717_length_477_cov_1.903465_g11470_i0 | PRJNA774958 | 11717 | 477 | 1.903465 | 9.07952805 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 45.1 | 0.0371 | NR | MEM6277946.1 | 2026799 | g11470 | i0 | 40 | 0.408805031446541 | 65 | 38 | 40.3 | 1 | 467 | 276 | 6 | 70 | MEM6277946.1 D-Ala-D-Ala carboxypeptidase family metallohydrolase [Verrucomicrobiota bacterium] | diamond | 195 | 45.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32488016 | 32488016 | PRJNA774958_P_NODE_35259_length_248_cov_0.880000_g35012_i0 | PRJNA774958 | 35259 | 248 | 0.88 | 2.1824 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 42.4 | 0.0486 | NR | MDQ3624016.1 | 2026799 | g35012 | i0 | 27.3 | 0.798387096774194 | 66 | 48 | 79.8 | 0 | 219 | 22 | 95 | 160 | MDQ3624016.1 diacylglycerol kinase family lipid kinase [Verrucomicrobiota bacterium] | diamond | 198 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;