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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA773778" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 29 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA773778 · 29 ✖

analysis 1

  • diamond · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16053955 16053955 PRJNA773778_S_NODE_43013_length_248_cov_0.862857_g42863_i0 PRJNA773778 43013 248 0.862857 2.13988536 Dipodomys ordii 10020 Chordata Chordata 103 1.56e-23   NR XP_012872059.1 10020 g42863 i0 69.2 0.786290322580645 65 20 78.6 0 5 199 310 374 XP_012872059.1 PREDICTED: endogenous retrovirus group K member 8 Pol protein-like [Dipodomys ordii] diamond 195 103 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Heteromyidae Dipodomys Dipodomys ordii
22428525 22428525 PRJNA773778_S_NODE_34238_length_269_cov_0.913265_g34088_i0 PRJNA773778 34238 269 0.913265 2.45668285 Rodentia 9989 Chordata Chordata 168 4.4e-46   NR XP_027245488.2 10029 g34088 i0 85.4 89.1412639405204 89 13 99.3 0 1 267 102 190 XP_027245488.2 LOW QUALITY PROTEIN: uncharacterized protein LOC107980128 isoform X2 [Cricetulus griseus] diamond 23979 169 0.994082840236686 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Cricetulus Cricetulus griseus
26831891 26831891 PRJNA773778_S_NODE_15441_length_363_cov_8.493103_g15291_i0 PRJNA773778 15441 363 8.493103 30.82996389 Antechinus flavipes 38775 Chordata Chordata 66.2 8.41e-10   NR XP_051829432.1 38775 g15291 i0 64.8 0.446280991735537 54 19 44.6 0 112 273 488 541 XP_051829432.1 LOW QUALITY PROTEIN: serine/threonine-protein kinase RIO1-like [Antechinus flavipes] diamond 162 66.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Dasyuromorphia Dasyuridae Antechinus Antechinus flavipes
26967864 26967864 PRJNA773778_S_NODE_31522_length_277_cov_8.151961_g31372_i0 PRJNA773778 31522 277 8.151961 22.58093197 Chordata 7711 Chordata Chordata 58.2 2.23e-7   NR MEE6497717.1 8439 g31372 i0 68.9 6.73646209386282 45 11 45.5 1 126 1 13 57 MEE6497717.1 hypothetical protein [Ascaphus truei] diamond 1866 58.5 0.994871794871795 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ascaphidae Ascaphus Ascaphus truei
26989846 26989846 PRJNA773778_S_NODE_46602_length_243_cov_0.905882_g46452_i0 PRJNA773778 46602 243 0.905882 2.20129326 Meriones unguiculatus 10047 Chordata Chordata 52.8 1.06e-5   NR XP_021486814.1 10047 g46452 i0 39 1.01234567901235 82 43 98.8 3 241 2 255 331 XP_021486814.1 ERV-BabFcenv provirus ancestral Env polyprotein-like [Meriones unguiculatus] diamond 246 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Meriones Meriones unguiculatus
27053431 27053431 PRJNA773778_S_NODE_46642_length_243_cov_0.905882_g46492_i0 PRJNA773778 46642 243 0.905882 2.20129326 Xenopus tropicalis 8364 Chordata Chordata 159 2.39e-47   NR KAE8589242.1 8364 g46492 i0 100 0.987654320987654 80 0 98.8 0 241 2 119 198 KAE8589242.1 hypothetical protein XENTR_v10017476 [Xenopus tropicalis] diamond 240 159 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus tropicalis
27085014 27085014 PRJNA773778_S_NODE_29002_length_287_cov_0.925234_g28852_i0 PRJNA773778 29002 287 0.925234 2.65542158 Rattus norvegicus 10116 Chordata Chordata 56.2 6.87e-7   NR XP_063138807.1 10116 g28852 i0 56.9 7.52613240418119 51 21 52.3 1 231 82 67 117 XP_063138807.1 uncharacterized protein LOC134485649 isoform X2 [Rattus norvegicus] diamond 2160 56.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
28095648 28095648 PRJNA773778_S_NODE_46145_length_244_cov_0.894737_g45995_i0 PRJNA773778 46145 244 0.894737 2.18315828 Xenopus tropicalis 8364 Chordata Chordata 51.6 1.82e-6   NR KAE8621803.1 8364 g45995 i0 60 0.55327868852459 45 14 50.4 1 2 124 7 51 KAE8621803.1 hypothetical protein XENTR_v10004981 [Xenopus tropicalis] diamond 135 51.6 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus tropicalis
28348213 28348213 PRJNA773778_S_NODE_23666_length_309_cov_1.927966_g23516_i0 PRJNA773778 23666 309 1.927966 5.95741494 Polypterus senegalus 55291 Chordata Chordata 192 3.15e-59   NR KAG2468629.1 55291 g23516 i0 97.1 37.9708737864078 103 3 100 0 1 309 136 238 KAG2468629.1 RS7 protein, partial [Polypterus senegalus] diamond 11733 193 0.994818652849741 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
29421552 29421552 PRJNA773778_S_NODE_46569_length_243_cov_0.905882_g46419_i0 PRJNA773778 46569 243 0.905882 2.20129326 Ophiophagus hannah 8665 Chordata Chordata 119 4.26e-30   NR ETE71904.1 8665 g46419 i0 73.8 1.67901234567901 80 10 98.8 1 2 241 272 340 ETE71904.1 Myosin light polypeptide 6, partial [Ophiophagus hannah] diamond 408 119 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Elapidae Ophiophagus Ophiophagus hannah
29516296 29516296 PRJNA773778_S_NODE_2330_length_710_cov_1.585557_g2192_i0 PRJNA773778 2330 710 1.585557 11.2574547 Xenopus tropicalis 8364 Chordata Chordata 150 4.7999999999999996e-43   NR KAE8607339.1 8364 g2192 i0 98.6 0.304225352112676 72 1 30.4 0 216 1 1 72 KAE8607339.1 hypothetical protein XENTR_v10011145 [Xenopus tropicalis] diamond 216 150 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus tropicalis
29705490 29705490 PRJNA773778_S_NODE_47810_length_242_cov_0.905325_g47660_i0 PRJNA773778 47810 242 0.905325 2.1908865 Nyctereutes procyonoides 34880 Chordata Chordata 64.7 6.3e-10   NR CAD7679430.1 34880 g47660 i0 55.4 5.51652892561984 56 25 69.4 0 186 19 269 324 CAD7679430.1 unnamed protein product [Nyctereutes procyonoides] diamond 1335 64.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Nyctereutes Nyctereutes procyonoides
29832202 29832202 PRJNA773778_S_NODE_13551_length_383_cov_0.954839_g13401_i0 PRJNA773778 13551 383 0.954839 3.65703337 Muntiacus reevesi 9886 Chordata Chordata 211 2.45e-60   NR XP_065759881.1 9886 g13401 i0 76 1.95822454308094 125 30 97.9 0 383 9 1036 1160 XP_065759881.1 LOW QUALITY PROTEIN: uncharacterized protein [Muntiacus reevesi] diamond 750 211 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Muntiacus Muntiacus reevesi
30053212 30053212 PRJNA773778_S_NODE_15171_length_366_cov_1.788396_g15021_i0 PRJNA773778 15171 366 1.788396 6.54552936 Rattus norvegicus 10116 Chordata Chordata 108 1.15e-28   NR EDL78643.1 10116 g15021 i0 100 0.426229508196721 52 0 42.6 0 1 156 4 55 EDL78643.1 rCG55933 [Rattus norvegicus] diamond 156 108 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
30243040 30243040 PRJNA773778_S_NODE_36232_length_262_cov_2.010582_g36082_i0 PRJNA773778 36232 262 2.010582 5.26772484 Oxyuranus scutellatus 8668 Chordata Chordata 177 2.339999999999999e-55   NR AAZ38997.1 8668 g36082 i0 97.7 8.75954198473282 86 2 98.5 0 3 260 1 86 AAZ38997.1 adenine nucleotide translocator, partial [Oxyuranus scutellatus] diamond 2295 177 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Elapidae Oxyuranus Oxyuranus scutellatus
30685133 30685133 PRJNA773778_S_NODE_33293_length_272_cov_0.869347_g33143_i0 PRJNA773778 33293 272 0.869347 2.36462384 Sigmodon hispidus 42415 Chordata Chordata 59.7 1.87e-8   NR KAL1791695.1 42415 g33143 i0 57.8 0.705882352941177 64 27 70.6 0 10 201 119 182 KAL1791695.1 hypothetical protein HispidOSU_019015, partial [Sigmodon hispidus] diamond 192 59.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Sigmodon Sigmodon hispidus
30758039 30758039 PRJNA773778_S_NODE_38794_length_255_cov_1.120879_g38644_i0 PRJNA773778 38794 255 1.120879 2.85824145 root 1 Root_unresolved Root_unresolved 69.3 1.43e-11   NR ELR54420.1 72004 g38644 i0 66.7 1.67058823529412 48 16 56.5 0 20 163 17 64 ELR54420.1 hypothetical protein M91_02152 [Bos mutus] diamond 426 69.7 0.994261119081779 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
31010657 31010657 PRJNA773778_S_NODE_39094_length_254_cov_1.276243_g38944_i0 PRJNA773778 39094 254 1.276243 3.24165722 root 1 Root_unresolved Root_unresolved 153 3.39e-45   NR KAK9406484.1 8729 g38944 i0 100 157.5 78 0 92.1 0 254 21 105 182 KAK9406484.1 hypothetical protein NXF25_005258 [Crotalus adamanteus] diamond 40005 153 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Viperidae Crotalus Crotalus adamanteus
31412217 31412217 PRJNA773778_S_NODE_8056_length_466_cov_12.526718_g7906_i0 PRJNA773778 8056 466 12.526718 58.37450588 Erpetoichthys calabaricus 27687 Chordata Chordata 52.8 1.11e-4   NR XP_028658934.2 27687 g7906 i0 46.3 0.431330472103004 67 34 43.1 1 297 97 426 490 XP_028658934.2 tigger transposable element-derived protein 1-like [Erpetoichthys calabaricus] diamond 201 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Erpetoichthys Erpetoichthys calabaricus
31918301 31918301 PRJNA773778_S_NODE_30537_length_281_cov_1.173077_g30387_i0 PRJNA773778 30537 281 1.173077 3.29634637 Erinaceus europaeus 9365 Chordata Chordata 74.7 3.31e-13   NR XP_060028243.1 9365 g30387 i0 42.7 0.950177935943061 89 51 95 0 275 9 1 89 XP_060028243.1 endogenous retrovirus group K member 8 Gag polyprotein-like [Erinaceus europaeus] diamond 267 74.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Eulipotyphla Erinaceidae Erinaceus Erinaceus europaeus
31918304 31918304 PRJNA773778_S_NODE_40217_length_251_cov_1.297753_g40067_i0 PRJNA773778 40217 251 1.297753 3.25736003 Mastomys coucha 35658 Chordata Chordata 42.7 0.039   NR XP_031246948.1 35658 g40067 i0 67.5 0.47808764940239 40 12 46.6 1 237 121 61 100 XP_031246948.1 uncharacterized protein LOC116104569 [Mastomys coucha] diamond 120 42.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mastomys Mastomys coucha
31981432 31981432 PRJNA773778_S_NODE_34918_length_266_cov_1.948187_g34768_i0 PRJNA773778 34918 266 1.948187 5.18217742 Ailuropoda melanoleuca 9646 Chordata Chordata 73.6 1.66e-13   NR XP_034499760.1 9646 g34768 i0 49.3 2.39097744360902 69 34 77.8 1 235 29 78 145 XP_034499760.1 ORM1-like protein 2 isoform X1 [Ailuropoda melanoleuca] diamond 636 73.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Ursidae Ailuropoda Ailuropoda melanoleuca
32392906 32392906 PRJNA773778_S_NODE_20939_length_324_cov_0.824701_g20789_i0 PRJNA773778 20939 324 0.824701 2.67203124 Meriones unguiculatus 10047 Chordata Chordata 92 4.44e-19   NR XP_021486814.1 10047 g20789 i0 46.7 0.851851851851852 92 49 85.2 0 301 26 87 178 XP_021486814.1 ERV-BabFcenv provirus ancestral Env polyprotein-like [Meriones unguiculatus] diamond 276 92 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Meriones Meriones unguiculatus
32424556 32424556 PRJNA773778_S_NODE_27279_length_293_cov_4.900000_g27129_i0 PRJNA773778 27279 293 4.9 14.357 Myotis myotis 51298 Chordata Chordata 50.4 1.23e-4   NR XP_036187396.1 51298 g27129 i0 35.1 0.78839590443686 77 50 78.8 0 251 21 27 103 XP_036187396.1 LOW QUALITY PROTEIN: PRELI domain-containing protein 1, mitochondrial-like [Myotis myotis] diamond 231 50.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Vespertilionidae Myotis Myotis myotis
32424558 32424558 PRJNA773778_S_NODE_41539_length_250_cov_0.864407_g41389_i0 PRJNA773778 41539 250 0.864407 2.1610175 Cygnus olor 8869 Chordata Chordata 78.6 9.54e-15   NR XP_040431241.1 8869 g41389 i0 94.3 4.44 35 2 42 0 105 1 114 148 XP_040431241.1 actin-related protein 2/3 complex subunit 1B isoform X1 [Cygnus olor] diamond 1110 78.6 1 Eukaryota Opisthokonta Metazoa Chordata Aves Anseriformes Anatidae Cygnus Cygnus olor
32529171 32529171 PRJNA773778_S_NODE_2859_length_661_cov_5.304422_g2715_i0 PRJNA773778 2859 661 5.304422 35.06222942 Chordata 7711 Chordata Chordata 144 2.55e-38   NR XP_032815121.1 7757 g2715 i0 41 3.34493192133132 188 106 84.4 3 657 100 91 275 XP_032815121.1 ER membrane protein complex subunit 2 [Petromyzon marinus] diamond 2211 144 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Petromyzon Petromyzon marinus
32623519 32623519 PRJNA773778_S_NODE_32140_length_275_cov_3.029703_g31990_i0 PRJNA773778 32140 275 3.029703 8.33168325 root 1 Root_unresolved Root_unresolved 173 1.06e-51   NR XP_027263554.2 10029 g31990 i0 98.9 51.24 91 1 99.3 0 273 1 38 128 XP_027263554.2 40S ribosomal protein S3 isoform X2 [Cricetulus griseus] diamond 14091 174 0.994252873563218 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Cricetulus Cricetulus griseus
32780872 32780872 PRJNA773778_S_NODE_14300_length_374_cov_14.315615_g14150_i0 PRJNA773778 14300 374 14.315615 53.5404001 Passeriformes 9126 Chordata Chordata 102 7.55e-24   NR XP_015507185.1 9157 g14150 i0 95.9 16.1390374331551 49 2 39.3 0 228 374 50 98 XP_015507185.1 nicotinamide riboside kinase 2 [Parus major] diamond 6036 103 0.990291262135922 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Paridae Parus Parus major
32897337 32897337 PRJNA773778_S_NODE_38620_length_255_cov_1.692308_g38470_i0 PRJNA773778 38620 255 1.692308 4.3153854 Xenopus tropicalis 8364 Chordata Chordata 158 3.08e-47   NR KAE8594808.1 8364 g38470 i0 94.9 0.917647058823529 78 4 91.8 0 5 238 100 177 KAE8594808.1 hypothetical protein XENTR_v10019809 [Xenopus tropicalis] diamond 234 158 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus tropicalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;