RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA773625" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA773625 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16051858 16051858 PRJNA773625_P_NODE_6553_length_175_cov_2.246032_g6538_i0 PRJNA773625 6553 175 2.246032 3.930556 Dothideomycetes 147541 Fungi Fungi 78.2 4.86e-15   NR XP_069232564.1 1052096 g6538 i0 67.9 2.64 53 17 90.9 0 14 172 684 736 XP_069232564.1 uncharacterized protein WHR41_01592 [Cladosporium halotolerans] diamond 462 78.2 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans
27021744 27021744 PRJNA773625_P_NODE_8542_length_167_cov_0.881356_g8527_i0 PRJNA773625 8542 167 0.881356 1.47186452 Epicoccum nigrum 105696 Fungi Fungi 112 2.9e-28   NR KAG9197716.1 105696 g8527 i0 98.2 0.988023952095808 55 1 98.8 0 1 165 175 229 KAG9197716.1 hypothetical protein G6514_001107 [Epicoccum nigrum] diamond 165 112 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Epicoccum Epicoccum nigrum
28506116 28506116 PRJNA773625_P_NODE_6567_length_175_cov_1.412698_g6552_i0 PRJNA773625 6567 175 1.412698 2.4722215 Cladosporium halotolerans 1052096 Fungi Fungi 83.2 2.12e-17   NR XP_069233990.1 1052096 g6552 i0 89.8 7.56 49 4 84 1 149 3 229 276 XP_069233990.1 Prohibitin-1 [Cladosporium halotolerans] diamond 1323 83.2 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;