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contig_metadata

31 rows where analysis = "diamond" and bioproject = "PRJNA773625"

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tax_superkingdom 2

bioproject 1

  • PRJNA773625 · 31 ✖

analysis 1

  • diamond · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13503124 13503124 PRJNA773625_P_NODE_9191_length_165_cov_0.896552_g9176_i0 PRJNA773625 9191 165 0.896552 1.4793108 root 1 Root_unresolved Root_unresolved 84 1.59e-17   NR XP_064402162.1 6063 g9176 i0 75 27.4545454545455 48 12 87.3 0 21 164 59 106 XP_064402162.1 LOW QUALITY PROTEIN: probable proline iminopeptidase [Halichondria panicea] diamond 4530 84 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
16051858 16051858 PRJNA773625_P_NODE_6553_length_175_cov_2.246032_g6538_i0 PRJNA773625 6553 175 2.246032 3.930556 Dothideomycetes 147541 Fungi Fungi 78.2 4.86e-15   NR XP_069232564.1 1052096 g6538 i0 67.9 2.64 53 17 90.9 0 14 172 684 736 XP_069232564.1 uncharacterized protein WHR41_01592 [Cladosporium halotolerans] diamond 462 78.2 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans
21151906 21151906 PRJNA773625_P_NODE_6797_length_172_cov_1.471545_g6782_i0 PRJNA773625 6797 172 1.471545 2.5310574 Cellulophaga sp. BC115SP 2683263 Bacteria Bacteria 80.9 5.24e-16   NR WP_166550734.1 2683263 g6782 i0 100 0.680232558139535 39 0 68 0 147 31 954 992 WP_166550734.1 PAS domain S-box protein [Cellulophaga sp. BC115SP] diamond 117 80.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Cellulophaga Cellulophaga sp. BC115SP
23702185 23702185 PRJNA773625_P_NODE_3079_length_238_cov_1.338624_g3064_i0 PRJNA773625 3079 238 1.338624 3.18592512 Candidatus Mariimomonas ferrooxydans 2910918 Bacteria Bacteria 55.8 7.68e-8   NR MEF9438474.1 2910918 g3064 i0 83.9 0.390756302521008 31 5 39.1 0 111 19 76 106 MEF9438474.1 hypothetical protein [Candidatus Mariimomonas ferrooxydans] diamond 93 55.8 1 Bacteria   Pseudomonadati Nitrospirota Thermodesulfovibrionia Candidatus Mariimomonadales Candidatus Mariimomonadaceae Candidatus Mariimomonas Candidatus Mariimomonas ferrooxydans
26800124 26800124 PRJNA773625_P_NODE_10021_length_164_cov_0.904348_g10006_i0 PRJNA773625 10021 164 0.904348 1.48313072 Malassezia cuniculi 948313 Fungi Fungi 48.1 1.59e-4   NR WFD36434.1 948313 g10006 i0 92.6 0.49390243902439 27 2 49.4 0 3 83 428 454 WFD36434.1 hypothetical protein MCUN1_003313 [Malassezia cuniculi] diamond 81 48.1 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia cuniculi
26895356 26895356 PRJNA773625_P_NODE_7241_length_169_cov_0.866667_g7226_i0 PRJNA773625 7241 169 0.866667 1.46466723 Chlamydiota bacterium 2081524 Bacteria Bacteria 90.5 3.57e-20   NR NGX60004.1 2081524 g7226 i0 80.9 2.44970414201183 47 9 83.4 0 29 169 135 181 NGX60004.1 hypothetical protein [Chlamydiota bacterium] diamond 414 90.5 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
26936231 26936231 PRJNA773625_P_NODE_8462_length_167_cov_0.881356_g8447_i0 PRJNA773625 8462 167 0.881356 1.47186452 Magnoliopsida 3398 Plants Plants 107 7.27e-26   NR XP_015696260.2 4533 g8447 i0 92.7 3.95209580838323 55 4 98.8 0 166 2 202 256 XP_015696260.2 probable purine permease 5 [Oryza brachyantha] diamond 660 107 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza brachyantha
27021744 27021744 PRJNA773625_P_NODE_8542_length_167_cov_0.881356_g8527_i0 PRJNA773625 8542 167 0.881356 1.47186452 Epicoccum nigrum 105696 Fungi Fungi 112 2.9e-28   NR KAG9197716.1 105696 g8527 i0 98.2 0.988023952095808 55 1 98.8 0 1 165 175 229 KAG9197716.1 hypothetical protein G6514_001107 [Epicoccum nigrum] diamond 165 112 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Epicoccum Epicoccum nigrum
27116355 27116355 PRJNA773625_P_NODE_10602_length_163_cov_0.912281_g10587_i0 PRJNA773625 10602 163 0.912281 1.48701803 Phyllostachys edulis 38705 Plants Plants 52 6.59e-6   NR ADB85343.1 38705 g10587 i0 69.4 0.662576687116564 36 11 66.3 0 110 3 1 36 ADB85343.1 putative transposon protein [Phyllostachys edulis] diamond 108 52 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phyllostachys Phyllostachys edulis
27284131 27284131 PRJNA773625_P_NODE_4243_length_210_cov_1.024845_g4228_i0 PRJNA773625 4243 210 1.024845 2.1521745 Legionella 445 Bacteria Bacteria 56.6 3.02e-7   NR WP_019233145.1 28082 g4228 i0 58.1 5.88571428571429 43 18 61.4 0 57 185 162 204 WP_019233145.1 hypothetical protein [Legionella anisa] diamond 1236 56.6 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Legionellales Legionellaceae Legionella Legionella anisa
28001109 28001109 PRJNA773625_P_NODE_10805_length_162_cov_0.920354_g10790_i0 PRJNA773625 10805 162 0.920354 1.49097348 Megamonas sp. 2049033 Bacteria Bacteria 101 6.620000000000001e-26   NR WP_287793925.1 2049033 g10790 i0 96.2 0.981481481481482 53 2 98.1 0 161 3 15 67 WP_287793925.1 PTS sugar transporter subunit IIA, partial [Megamonas sp.] diamond 159 101 1 Bacteria   Bacillati Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas sp.
28032637 28032637 PRJNA773625_P_NODE_11065_length_162_cov_0.920354_g11050_i0 PRJNA773625 11065 162 0.920354 1.49097348 Pseudomonas sp. 306 Bacteria Bacteria 92.4 1.68e-20   NR WP_340664408.1 306 g11050 i0 85.2 1 54 8 100 0 162 1 10 63 WP_340664408.1 fatty acid desaturase [Pseudomonas sp.] diamond 162 92.4 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas sp.
28032638 28032638 PRJNA773625_P_NODE_9485_length_165_cov_0.896552_g9470_i0 PRJNA773625 9485 165 0.896552 1.4793108 Enterocloster sp. 2719315 Bacteria Bacteria 101 9.86e-25   NR WP_337933109.1 2719315 g9470 i0 90.7 0.981818181818182 54 5 98.2 0 3 164 148 201 WP_337933109.1 HAD family hydrolase [Enterocloster sp.] diamond 162 101 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Enterocloster sp.
28159032 28159032 PRJNA773625_P_NODE_3785_length_219_cov_1.976471_g3770_i0 PRJNA773625 3785 219 1.976471 4.32847149 Patescibacteria group bacterium 2052139 Bacteria Bacteria 68.6 2.12e-11   NR MDQ1344170.1 2052139 g3770 i0 91.7 1.97260273972603 36 3 49.3 0 110 3 14 49 MDQ1344170.1 topoisomerase [Patescibacteria group bacterium] diamond 432 68.6 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28506116 28506116 PRJNA773625_P_NODE_6567_length_175_cov_1.412698_g6552_i0 PRJNA773625 6567 175 1.412698 2.4722215 Cladosporium halotolerans 1052096 Fungi Fungi 83.2 2.12e-17   NR XP_069233990.1 1052096 g6552 i0 89.8 7.56 49 4 84 1 149 3 229 276 XP_069233990.1 Prohibitin-1 [Cladosporium halotolerans] diamond 1323 83.2 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans
28642050 28642050 PRJNA773625_P_NODE_3647_length_223_cov_0.867816_g3632_i0 PRJNA773625 3647 223 0.867816 1.93522968 Bdellovibrio 958 Bacteria Bacteria 67 5.02e-12   NR WP_011164603.1 959 g3632 i0 71.8 5.74439461883408 39 11 52.5 0 107 223 6 44 WP_011164603.1 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB [Bdellovibrio bacteriovorus] diamond 1281 67.4 0.99406528189911 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
28821546 28821546 PRJNA773625_P_NODE_9888_length_164_cov_0.904348_g9873_i0 PRJNA773625 9888 164 0.904348 1.48313072 Francisella sp. 2047875 Bacteria Bacteria 124 2.67e-33   NR PZU04837.1 2047875 g9873 i0 100 0.98780487804878 54 0 98.8 0 3 164 56 109 PZU04837.1 MAG: thymidylate synthase [Francisella sp.] diamond 162 124 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Thiotrichales Francisellaceae Francisella Francisella sp.
29043053 29043053 PRJNA773625_P_NODE_10108_length_164_cov_0.904348_g10093_i0 PRJNA773625 10108 164 0.904348 1.48313072 Oryza sativa Japonica Group 39947 Plants Plants 59.7 1.32e-8   NR AAM18766.1 39947 g10093 i0 74.2 1.6280487804878 31 8 56.7 0 3 95 299 329 AAM18766.1 putative copia-like retrotransposon Hopscotch polyprotein [Oryza sativa Japonica Group] diamond 267 59.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
29043054 29043054 PRJNA773625_P_NODE_10428_length_163_cov_0.912281_g10413_i0 PRJNA773625 10428 163 0.912281 1.48701803 Phyllostachys edulis 38705 Plants Plants 90.5 9.87e-22   NR ADB85422.1 38705 g10413 i0 81.1 1.87730061349693 53 10 97.5 0 163 5 48 100 ADB85422.1 putative retrotransposon protein [Phyllostachys edulis] diamond 306 90.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phyllostachys Phyllostachys edulis
29610883 29610883 PRJNA773625_P_NODE_8630_length_166_cov_1.213675_g8615_i0 PRJNA773625 8630 166 1.213675 2.0147005 Cellulophaga sp. BC115SP 2683263 Bacteria Bacteria 117 1.51e-30   NR WP_370520429.1 2683263 g8615 i0 96.4 0.993975903614458 55 2 99.4 0 1 165 62 116 WP_370520429.1 helix-turn-helix domain-containing protein [Cellulophaga sp. BC115SP] diamond 165 117 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Cellulophaga Cellulophaga sp. BC115SP
29968129 29968129 PRJNA773625_P_NODE_8511_length_167_cov_0.881356_g8496_i0 PRJNA773625 8511 167 0.881356 1.47186452 Promicromonospora 43676 Bacteria Bacteria 46.2 3.87e-4   NR WP_182615028.1 88382 g8496 i0 74.1 0.970059880239521 27 7 48.5 0 85 165 1 27 WP_182615028.1 Lrp/AsnC family transcriptional regulator [Promicromonospora sukumoe] diamond 162 46.2 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Promicromonosporaceae Promicromonospora Promicromonospora sukumoe
29990186 29990186 PRJNA773625_P_NODE_7611_length_168_cov_0.873950_g7596_i0 PRJNA773625 7611 168 0.87395 1.468236 uncultured Psychrobacter sp. 259303 Bacteria Bacteria 95.9 5.21e-22   NR WP_339663848.1 259303 g7596 i0 82.1 1 56 10 100 0 1 168 194 249 WP_339663848.1 PilW family protein [uncultured Psychrobacter sp.] diamond 168 95.9 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Psychrobacter uncultured Psychrobacter sp.
30274778 30274778 PRJNA773625_P_NODE_7872_length_168_cov_0.873950_g7857_i0 PRJNA773625 7872 168 0.87395 1.468236 Klebsiella pneumoniae 573 Bacteria Bacteria 40 0.0403   NR WP_416532971.1 573 g7857 i0 85.7 0.375 21 3 37.5 0 82 144 48 68 WP_416532971.1 hypothetical protein, partial [Klebsiella pneumoniae] diamond 63 40 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae
30306589 30306589 PRJNA773625_P_NODE_8212_length_167_cov_0.881356_g8197_i0 PRJNA773625 8212 167 0.881356 1.47186452 Pontibacter virosus 1765052 Bacteria Bacteria 80.9 1.6e-17   NR WP_116541989.1 1765052 g8197 i0 73.1 0.934131736526946 52 14 93.4 0 156 1 1 52 WP_116541989.1 hypothetical protein [Pontibacter virosus] diamond 156 80.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Hymenobacteraceae Pontibacter Pontibacter virosus
30473752 30473752 PRJNA773625_P_NODE_8713_length_166_cov_0.888889_g8698_i0 PRJNA773625 8713 166 0.888889 1.47555574 Bacteroidota 976 Bacteria Bacteria 87.4 8.26e-19   NR WP_044171645.1 103 g8698 i0 95.7 1.66265060240964 46 2 83.1 0 3 140 184 229 WP_044171645.1 hypothetical protein [Flectobacillus major] diamond 276 87.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Flectobacillus Flectobacillus major
30852712 30852712 PRJNA773625_P_NODE_10434_length_163_cov_0.912281_g10419_i0 PRJNA773625 10434 163 0.912281 1.48701803 Gemmatirosa 1706036 Bacteria Bacteria 103 6.25e-25   NR CAA9331339.1 246130 g10419 i0 90.7 4.96932515337423 54 5 99.4 0 1 162 90 143 CAA9331339.1 MAG: UDP-glucose 4-epimerase [uncultured Gemmatimonadaceae bacterium] diamond 810 104 0.990384615384615 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   uncultured Gemmatimonadaceae bacterium
31222175 31222175 PRJNA773625_P_NODE_8915_length_166_cov_0.888889_g8900_i0 PRJNA773625 8915 166 0.888889 1.47555574 Mediterraneibacter faecis 592978 Bacteria Bacteria 92.8 2.87e-20   NR WP_117961929.1 592978 g8900 i0 83.3 0.975903614457831 54 9 97.6 0 3 164 192 245 WP_117961929.1 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase [Mediterraneibacter faecis] diamond 162 92.8 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Mediterraneibacter Mediterraneibacter faecis
31412206 31412206 PRJNA773625_P_NODE_7176_length_169_cov_0.866667_g7161_i0 PRJNA773625 7176 169 0.866667 1.46466723 Acidobacteriota bacterium 1978231 Bacteria Bacteria 72.4 1.04e-13   NR MDQ3751171.1 1978231 g7161 i0 62.5 6.94082840236686 56 21 99.4 0 168 1 92 147 MDQ3751171.1 glycoside hydrolase family 3 C-terminal domain-containing protein [Acidobacteriota bacterium] diamond 1173 72.4 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31538871 31538871 PRJNA773625_P_NODE_10776_length_162_cov_0.920354_g10761_i0 PRJNA773625 10776 162 0.920354 1.49097348 Cellulophaga sp. BC115SP 2683263 Bacteria Bacteria 52.4 1.34e-6   NR WP_166551959.1 2683263 g10761 i0 96.2 0.481481481481481 26 1 48.1 0 96 19 1 26 WP_166551959.1 MarR family winged helix-turn-helix transcriptional regulator [Cellulophaga sp. BC115SP] diamond 78 52.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Cellulophaga Cellulophaga sp. BC115SP
31918296 31918296 PRJNA773625_P_NODE_9757_length_164_cov_0.904348_g9742_i0 PRJNA773625 9757 164 0.904348 1.48313072 Malassezia equina 1381935 Fungi Fungi 58.2 4.63e-8   NR WFD24159.1 1381935 g9742 i0 53.2 0.859756097560976 47 22 86 0 24 164 775 821 WFD24159.1 ubiquitinyl hydrolase 1 [Malassezia equina] diamond 141 58.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia equina
32370940 32370940 PRJNA773625_P_NODE_3459_length_227_cov_0.938202_g3444_i0 PRJNA773625 3459 227 0.938202 2.12971854 Legionella 445 Bacteria Bacteria 52.4 1.22e-5   NR WP_045096350.1 96230 g3444 i0 42.6 1.87665198237885 68 39 89.9 0 19 222 99 166 WP_045096350.1 cyclic nucleotide-binding domain-containing protein [Legionella fallonii] diamond 426 52.4 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Legionellales Legionellaceae Legionella Legionella fallonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;