RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA773247" and tax_phylum = "Candidatus Sysuimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sysuimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA773247 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28316685 28316685 PRJNA773247_P_NODE_15606_length_374_cov_11.199336_g15522_i0 PRJNA773247 15606 374 11.199336 41.88551664 Candidatus Caldifonticola tengchongensis 3377998 Bacteria Bacteria 165 7.97e-48   NR MDR5697911.1 3377998 g15522 i0 73.7 0.914438502673797 114 29 91.4 1 12 353 174 286 MDR5697911.1 N-acetylneuraminate synthase family protein [Candidatus Caldifonticola tengchongensis] diamond 342 165 1 Bacteria   Bacillati Candidatus Sysuimicrobiota Candidatus Sysuimicrobiia Candidatus Sysuimicrobiales Candidatus Sysuimicrobiaceae Candidatus Caldifonticola Candidatus Caldifonticola tengchongensis
31854916 31854916 PRJNA773247_P_NODE_26097_length_273_cov_3.370000_g26013_i0 PRJNA773247 26097 273 3.37 9.2001 Candidatus Geohabitans tengchongensis 3378011 Bacteria Bacteria 79.7 5.37e-15   NR MDR7492190.1 3378011 g26013 i0 56 1.67032967032967 75 32 82.4 1 4 228 246 319 MDR7492190.1 hypothetical protein [Candidatus Geohabitans tengchongensis] diamond 456 79.7 1 Bacteria   Bacillati Candidatus Sysuimicrobiota Candidatus Sysuimicrobiia Candidatus Sysuimicrobiales Candidatus Humicultoraceae Candidatus Geohabitans Candidatus Geohabitans tengchongensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;