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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA773247" and tax_phylum = "Candidatus Shapironibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Shapironibacteriota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA773247 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27337897 27337897 PRJNA773247_P_NODE_1963_length_1422_cov_10.973314_g1923_i0 PRJNA773247 1963 1422 10.973314 156.04052508 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 110 3.789999999999999e-23   NR MFA7301882.1 2053613 g1923 i0 48.8 0.255274261603376 121 50 25.5 4 18 380 161 269 MFA7301882.1 hypothetical protein [Candidatus Shapirobacteria bacterium] diamond 363 110 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
29210378 29210378 PRJNA773247_P_NODE_19929_length_321_cov_7.302419_g19845_i0 PRJNA773247 19929 321 7.302419 23.44076499 Bacteria 2 Bacteria Bacteria 89.7 3.02e-18   NR MFA5025545.1 2053613 g19845 i0 69.4 1.73831775700935 62 19 57.9 0 188 3 10 71 MFA5025545.1 ATP-dependent DNA helicase [Candidatus Shapirobacteria bacterium] diamond 558 90.1 0.995560488346282 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
29737241 29737241 PRJNA773247_P_NODE_9270_length_523_cov_3.564444_g9187_i0 PRJNA773247 9270 523 3.564444 18.64204212 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 122 1.2399999999999999e-28   NR MFA7301986.1 2053613 g9187 i0 37.2 0.986615678776291 172 105 97.5 3 519 10 134 304 MFA7301986.1 hypothetical protein [Candidatus Shapirobacteria bacterium] diamond 516 122 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
29768922 29768922 PRJNA773247_P_NODE_1491_length_1612_cov_27.323587_g1461_i0 PRJNA773247 1491 1612 27.323587 440.45622244 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 276 2.66e-79   NR MFA7301986.1 2053613 g1461 i0 34.1 0.917493796526055 493 305 90.1 9 1610 159 27 508 MFA7301986.1 hypothetical protein [Candidatus Shapirobacteria bacterium] diamond 1479 276 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
29927134 29927134 PRJNA773247_P_NODE_33451_length_244_cov_0.900585_g33367_i0 PRJNA773247 33451 244 0.900585 2.1974274 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 46.2 6.31e-4   NR MFA7301876.1 2053613 g33367 i0 49.2 0.774590163934426 63 31 77.5 1 222 34 14 75 MFA7301876.1 hypothetical protein [Candidatus Shapirobacteria bacterium] diamond 189 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
31001290 31001290 PRJNA773247_P_NODE_29854_length_252_cov_11.391061_g29770_i0 PRJNA773247 29854 252 11.391061 28.70547372 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 90.5 6.71e-19   NR MFA7301986.1 2053613 g29770 i0 47.4 0.904761904761905 76 40 90.5 0 243 16 74 149 MFA7301986.1 hypothetical protein [Candidatus Shapirobacteria bacterium] diamond 228 90.5 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium
32298291 32298291 PRJNA773247_P_NODE_15679_length_373_cov_11.006667_g15595_i0 PRJNA773247 15679 373 11.006667 41.05486791 Candidatus Shapirobacteria bacterium 2053613 Bacteria Bacteria 83.6 8.27e-16   NR MDD4027033.1 2053613 g15595 i0 50 0.756032171581769 94 47 75.6 0 367 86 646 739 MDD4027033.1 hypothetical protein [Candidatus Shapirobacteria bacterium] diamond 282 83.6 1 Bacteria Bacteria candidate phyla   Candidatus Shapironibacteriota         Candidatus Shapirobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;