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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA773247" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 18 ✖

bioproject 1

  • PRJNA773247 · 18 ✖

analysis 1

  • diamond · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16051538 16051538 PRJNA773247_P_NODE_3133_length_1093_cov_2.636275_g3072_i0 PRJNA773247 3133 1093 2.636275 28.81448575 Hordeum vulgare subsp. vulgare 112509 Plants Plants 660 8.249999999999999e-231   NR BAJ97973.1 112509 g3072 i0 89 0.999085086916743 364 40 99.9 0 1093 2 314 677 BAJ97973.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 1092 660 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
21151677 21151677 PRJNA773247_P_NODE_5697_length_730_cov_61.864536_g5617_i0 PRJNA773247 5697 730 61.864536 451.6111128 Oleaceae 4144 Plants Plants 420 1.48e-142   NR KAL2484605.1 126358 g5617 i0 93.6 1.67671232876712 204 13 83.8 0 728 117 342 545 KAL2484605.1 Pectate lyase family protein [Abeliophyllum distichum] diamond 1224 423 0.99290780141844 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Abeliophyllum Abeliophyllum distichum
26831863 26831863 PRJNA773247_P_NODE_26501_length_271_cov_1.727273_g26417_i0 PRJNA773247 26501 271 1.727273 4.68090983 Oryza sativa Japonica Group 39947 Plants Plants 43.5 0.0111   NR ABA96333.1 39947 g26417 i0 38.3 0.664206642066421 60 35 64.2 1 207 34 64 123 ABA96333.1 hypothetical protein LOC_Os12g13090 [Oryza sativa Japonica Group] diamond 180 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
27179575 27179575 PRJNA773247_P_NODE_30262_length_251_cov_0.865169_g30178_i0 PRJNA773247 30262 251 0.865169 2.17157419 Oryza glaberrima 4538 Plants Plants 57.8 2.08e-7   NR XP_052151619.1 4538 g30178 i0 66 0.633466135458167 53 15 61 3 97 249 1 52 XP_052151619.1 wall-associated receptor kinase 2-like [Oryza glaberrima] diamond 159 57.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza glaberrima
27685465 27685465 PRJNA773247_P_NODE_24024_length_287_cov_2.411215_g23940_i0 PRJNA773247 24024 287 2.411215 6.92018705 Triticum urartu 4572 Plants Plants 171 1.69e-51   NR XP_048545710.1 4572 g23940 i0 88.4 1.98606271777003 95 11 99.3 0 285 1 82 176 XP_048545710.1 uncharacterized protein LOC125524713 [Triticum urartu] diamond 570 171 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum urartu
27937821 27937821 PRJNA773247_P_NODE_12525_length_430_cov_50.551821_g12442_i0 PRJNA773247 12525 430 50.551821 217.3728303 Corymbia citriodora subsp. variegata 360336 Plants Plants 181 1.52e-53   NR KAF7846358.1 360336 g12442 i0 66.9 2.54651162790698 121 40 84.4 0 430 68 182 302 KAF7846358.1 hypothetical protein BT93_L4503 [Corymbia citriodora subsp. variegata] diamond 1095 181 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Myrtales Myrtaceae Corymbia Corymbia citriodora
27969261 27969261 PRJNA773247_P_NODE_10045_length_496_cov_12.042553_g9962_i0 PRJNA773247 10045 496 12.042553 59.73106288 Sphagnum jensenii 128206 Plants Plants 151 3.7e-40   NR CAK9250667.1 128206 g9962 i0 68 0.622983870967742 103 33 62.3 0 5 313 259 361 CAK9250667.1 unnamed protein product [Sphagnum jensenii] diamond 309 151 1 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum jensenii
28190077 28190077 PRJNA773247_P_NODE_22186_length_301_cov_2.842105_g22102_i0 PRJNA773247 22186 301 2.842105 8.55473605 Tanacetum cinerariifolium 118510 Plants Plants 43.9 0.0302   NR GEW19955.1 118510 g22102 i0 25 0.877076411960133 88 65 87.7 1 289 26 563 649 GEW19955.1 Ty3/gypsy retrotransposon protein [Tanacetum cinerariifolium] diamond 264 43.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
29147456 29147456 PRJNA773247_P_NODE_33249_length_244_cov_2.280702_g33165_i0 PRJNA773247 33249 244 2.280702 5.56491288 Eukaryota 2759 Plants Plants 48.1 4.64e-4   NR XP_021321666.1 4558 g33165 i0 35.3 4.22950819672131 68 41 79.9 1 237 43 339 406 XP_021321666.1 uncharacterized protein LOC8084238 [Sorghum bicolor] diamond 1032 48.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Sorghum Sorghum bicolor
29484601 29484601 PRJNA773247_P_NODE_34770_length_241_cov_1.375000_g34686_i0 PRJNA773247 34770 241 1.375 3.31375 Colocasia esculenta 4460 Plants Plants 43.1 0.0243   NR MQL73336.1 4460 g34686 i0 39.6 0.659751037344398 53 31 64.7 1 194 39 37 89 MQL73336.1 hypothetical protein [Colocasia esculenta] diamond 159 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Alismatales Araceae Colocasia Colocasia esculenta
29800543 29800543 PRJNA773247_P_NODE_37211_length_205_cov_6.151515_g37127_i0 PRJNA773247 37211 205 6.151515 12.61060575 Aegilops tauschii subsp. strangulata 200361 Plants Plants 59.3 2.17e-8   NR XP_020162037.1 200361 g37127 i0 66.7 0.746341463414634 51 16 74.6 1 51 203 1 50 XP_020162037.1 uncharacterized mitochondrial protein AtMg00810-like [Aegilops tauschii subsp. strangulata] diamond 153 59.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Aegilops Aegilops tauschii
30220730 30220730 PRJNA773247_P_NODE_26912_length_268_cov_6.497436_g26828_i0 PRJNA773247 26912 268 6.497436 17.41312848 root 1 Root_unresolved Root_unresolved 108 2.4e-25   NR KAK4833126.1 4023 g26828 i0 62.5 1.8134328358209 80 30 89.6 0 21 260 211 290 KAK4833126.1 hypothetical protein QYF36_003213 [Acer negundo] diamond 486 108 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Sapindaceae Acer Acer negundo
30916128 30916128 PRJNA773247_P_NODE_2934_length_1143_cov_44.731776_g2876_i0 PRJNA773247 2934 1143 44.731776 511.28419968 Eukaryota 2759 Plants Plants 154 3.6599999999999997e-38   NR KAG0587589.1 3225 g2876 i0 35.4 9.36745406824147 316 184 80.8 11 47 970 130 433 KAG0587589.1 hypothetical protein KC19_2G175400 [Ceratodon purpureus] diamond 10707 154 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Pseudoditrichales Ditrichaceae Ceratodon Ceratodon purpureus
31390232 31390232 PRJNA773247_P_NODE_19176_length_329_cov_6.242188_g19092_i0 PRJNA773247 19176 329 6.242188 20.53679852 Malus 3749 Plants Plants 45.1 0.0147   NR RXI01597.1 3750 g19092 i0 50 0.875379939209726 48 21 43.8 2 100 243 185 229 RXI01597.1 hypothetical protein DVH24_014946 [Malus domestica] diamond 288 45.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Malus Malus domestica
32329928 32329928 PRJNA773247_P_NODE_34459_length_242_cov_0.911243_g34375_i0 PRJNA773247 34459 242 0.911243 2.20520806 Linum tenue 586396 Plants Plants 53.9 4.2e-6   NR CAI0449997.1 586396 g34375 i0 43.5 1.1404958677686 92 39 97.9 2 2 238 562 653 CAI0449997.1 unnamed protein product [Linum tenue] diamond 276 53.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Linaceae Linum Linum tenue
32529160 32529160 PRJNA773247_P_NODE_10999_length_468_cov_8.321519_g10916_i0 PRJNA773247 10999 468 8.321519 38.94470892 Magnoliopsida 3398 Plants Plants 126 2.89e-30   NR XP_059669628.1 4283 g10916 i0 45 8.67948717948718 151 74 96.8 2 457 5 332 473 XP_059669628.1 uncharacterized protein LOC132314847 [Cornus florida] diamond 4062 126 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cornales Cornaceae Cornus Cornus florida
32623507 32623507 PRJNA773247_P_NODE_15800_length_372_cov_1.585284_g15716_i0 PRJNA773247 15800 372 1.585284 5.89725648 Eukaryota 2759 Plants Plants 76.3 2.72e-13   NR KAI3719467.1 4217 g15716 i0 33.3 10.0241935483871 123 82 99.2 0 371 3 89 211 KAI3719467.1 hypothetical protein L6452_20366 [Arctium lappa] diamond 3729 77 0.990909090909091 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Arctium Arctium lappa
32865983 32865983 PRJNA773247_P_NODE_37480_length_196_cov_4.772358_g37396_i0 PRJNA773247 37480 196 4.772358 9.35382168 Coptis chinensis 261450 Plants Plants 44.7 0.0036   NR KAF9607271.1 261450 g37396 i0 72 0.76530612244898 25 7 38.3 0 181 107 122 146 KAF9607271.1 hypothetical protein IFM89_033478 [Coptis chinensis] diamond 150 44.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Ranunculaceae Coptis Coptis chinensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;