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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA772154" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 23 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA772154 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26673128 26673128 PRJNA772154_P_NODE_20261_length_247_cov_0.896552_g20076_i0 PRJNA772154 20261 247 0.896552 2.21448344 Crocuta crocuta 9678 Chordata Chordata 42 0.0262   NR KAF0882019.1 9678 g20076 i0 34.2 0.959514170040486 79 45 87.4 2 247 32 39 117 KAF0882019.1 LORF2 protein, partial [Crocuta crocuta] diamond 237 42 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Hyaenidae Crocuta Crocuta crocuta
26831841 26831841 PRJNA772154_P_NODE_18561_length_251_cov_0.876404_g18376_i0 PRJNA772154 18561 251 0.876404 2.19977404 Staurois parvus 386267 Chordata Chordata 48.5 1.33e-5   NR CAI9578589.1 386267 g18376 i0 67.9 0.669322709163347 28 9 33.5 0 121 38 4 31 CAI9578589.1 unnamed protein product [Staurois parvus] diamond 168 48.5 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
27053371 27053371 PRJNA772154_P_NODE_8762_length_392_cov_0.978056_g8577_i0 PRJNA772154 8762 392 0.978056 3.83397952 Apodemus speciosus 105296 Chordata Chordata 47.4 0.0041   NR GAB1293120.1 105296 g8577 i0 80 0.229591836734694 30 5 22.2 1 122 36 248 277 GAB1293120.1 Fibrinogen-like protein 1 [Apodemus speciosus] diamond 90 47.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Apodemus Apodemus speciosus
27337877 27337877 PRJNA772154_P_NODE_19863_length_248_cov_0.891429_g19678_i0 PRJNA772154 19863 248 0.891429 2.21074392 Erpetoichthys calabaricus 27687 Chordata Chordata 127 4.32e-34   NR XP_028659365.1 27687 g19678 i0 98.3 5.63709677419355 58 1 70.2 0 176 3 23 80 XP_028659365.1 acyl-protein thioesterase 1 isoform X1 [Erpetoichthys calabaricus] diamond 1398 127 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Erpetoichthys Erpetoichthys calabaricus
27779972 27779972 PRJNA772154_P_NODE_22024_length_243_cov_2.735294_g21839_i0 PRJNA772154 22024 243 2.735294 6.64676442 Bombina bombina 8345 Chordata Chordata 60.1 2.19e-8   NR XP_053556129.1 8345 g21839 i0 46.6 4.60493827160494 73 39 90.1 0 3 221 73 145 XP_053556129.1 uncharacterized protein LOC128647369 [Bombina bombina] diamond 1119 60.1 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bombinatoridae Bombina Bombina bombina
27811637 27811637 PRJNA772154_P_NODE_7584_length_432_cov_0.869081_g7399_i0 PRJNA772154 7584 432 0.869081 3.75442992 Lynx pardinus 191816 Chordata Chordata 66.6 1.71e-11   NR VFV26017.1 191816 g7399 i0 58.6 0.986111111111111 58 19 36.8 1 419 261 12 69 VFV26017.1 60s ribosomal protein l21-like, partial [Lynx pardinus] diamond 426 66.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Lynx Lynx pardinus
28348151 28348151 PRJNA772154_P_NODE_4506_length_619_cov_1.851648_g4326_i0 PRJNA772154 4506 619 1.851648 11.46170112 Staurois parvus 386267 Chordata Chordata 165 1.5399999999999998e-48   NR CAI9534117.1 386267 g4326 i0 76.1 0.445880452342488 92 22 44.6 0 537 262 14 105 CAI9534117.1 unnamed protein product [Staurois parvus] diamond 276 165 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
28506059 28506059 PRJNA772154_P_NODE_21007_length_246_cov_0.901734_g20822_i0 PRJNA772154 21007 246 0.901734 2.21826564 Polypterus senegalus 55291 Chordata Chordata 59.3 4.95e-8   NR KAG2460242.1 55291 g20822 i0 52.4 6.81707317073171 63 29 76.8 1 190 2 173 234 KAG2460242.1 TCB1 transposase, partial [Polypterus senegalus] diamond 1677 59.7 0.993299832495812 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
29579310 29579310 PRJNA772154_P_NODE_21230_length_245_cov_0.906977_g21045_i0 PRJNA772154 21230 245 0.906977 2.22209365 Aquarana catesbeiana 8400 Chordata Chordata 46.6 1.28e-4   NR PIO28982.1 8400 g21045 i0 66.7 0.36734693877551 30 10 36.7 0 98 187 13 42 PIO28982.1 hypothetical protein AB205_0072350 [Aquarana catesbeiana] diamond 90 46.6 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Aquarana Aquarana catesbeiana
29737187 29737187 PRJNA772154_P_NODE_21070_length_246_cov_0.861272_g20885_i0 PRJNA772154 21070 246 0.861272 2.11872912 Staurois parvus 386267 Chordata Chordata 67.8 3.99e-12   NR CAI9614493.1 386267 g20885 i0 63 0.658536585365854 54 16 65.9 1 52 213 70 119 CAI9614493.1 unnamed protein product, partial [Staurois parvus] diamond 162 67.8 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
29990140 29990140 PRJNA772154_P_NODE_21771_length_244_cov_0.912281_g21586_i0 PRJNA772154 21771 244 0.912281 2.22596564 Meriones unguiculatus 10047 Chordata Chordata 115 5.27e-28   NR XP_060232816.1 10047 g21586 i0 68.9 2.79098360655738 74 23 91 0 242 21 301 374 XP_060232816.1 uncharacterized protein LOC132651748 [Meriones unguiculatus] diamond 681 115 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Meriones Meriones unguiculatus
30084752 30084752 PRJNA772154_P_NODE_18272_length_252_cov_0.871508_g18087_i0 PRJNA772154 18272 252 0.871508 2.19620016 Rhinatrema bivittatum 194408 Chordata Chordata 107 5.98e-25   NR XP_029429446.1 194408 g18087 i0 69.9 24.702380952381 83 25 98.8 0 1 249 390 472 XP_029429446.1 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial isoform X2 [Rhinatrema bivittatum] diamond 6225 107 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Gymnophiona Rhinatrematidae Rhinatrema Rhinatrema bivittatum
30242977 30242977 PRJNA772154_P_NODE_19492_length_249_cov_0.886364_g19307_i0 PRJNA772154 19492 249 0.886364 2.20704636 Aquarana catesbeiana 8400 Chordata Chordata 150 1.01e-44   NR PIO26410.1 8400 g19307 i0 93.6 0.939759036144578 78 5 94 0 235 2 1 78 PIO26410.1 hypothetical protein AB205_0071520 [Aquarana catesbeiana] diamond 234 150 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Aquarana Aquarana catesbeiana
30338116 30338116 PRJNA772154_P_NODE_12372_length_316_cov_0.967078_g12187_i0 PRJNA772154 12372 316 0.967078 3.05596648 Bombina bombina 8345 Chordata Chordata 82 6.65e-17   NR XP_053549181.1 8345 g12187 i0 46.5 2.78164556962025 99 53 94 0 20 316 80 178 XP_053549181.1 uncharacterized protein LOC128640785 [Bombina bombina] diamond 879 82 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bombinatoridae Bombina Bombina bombina
30938129 30938129 PRJNA772154_P_NODE_17654_length_253_cov_0.866667_g17469_i0 PRJNA772154 17654 253 0.866667 2.19266751 Aquarana catesbeiana 8400 Chordata Chordata 53.5 6.39e-6   NR PIO38716.1 8400 g17469 i0 69.7 0.391304347826087 33 10 39.1 0 251 153 189 221 PIO38716.1 hypothetical protein AB205_0103790, partial [Aquarana catesbeiana] diamond 99 53.5 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Aquarana Aquarana catesbeiana
31380644 31380644 PRJNA772154_P_NODE_19436_length_249_cov_0.886364_g19251_i0 PRJNA772154 19436 249 0.886364 2.20704636 Meles meles 9662 Chordata Chordata 52 2.34e-5   NR XP_045881491.1 9662 g19251 i0 40.8 3.36144578313253 76 34 78.3 2 198 4 567 642 XP_045881491.1 LOW QUALITY PROTEIN: uncharacterized protein LOC123954405 [Meles meles] diamond 837 52 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Mustelidae Meles Meles meles
31706335 31706335 PRJNA772154_P_NODE_22837_length_242_cov_0.923077_g22652_i0 PRJNA772154 22837 242 0.923077 2.23384634 Chondrichthyes 7777 Chordata Chordata 160 1.8999999999999997e-48   NR AAN73378.1 7830 g22652 i0 96.3 66.3842975206612 80 3 99.2 0 3 242 22 101 AAN73378.1 ribosomal protein L8, partial [Scyliorhinus canicula] diamond 16065 161 0.993788819875776 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Carcharhiniformes Scyliorhinidae Scyliorhinus Scyliorhinus canicula
31728321 31728321 PRJNA772154_P_NODE_18757_length_250_cov_2.254237_g18572_i0 PRJNA772154 18757 250 2.254237 5.6355925 Rana temporaria 8407 Chordata Chordata 62 3.47e-9   NR XP_040216140.1 8407 g18572 i0 52.6 0.912 76 33 87.6 1 3 221 173 248 XP_040216140.1 ranaspumin-like [Rana temporaria] diamond 228 62 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Rana Rana temporaria
31760000 31760000 PRJNA772154_P_NODE_15817_length_271_cov_1.176768_g15632_i0 PRJNA772154 15817 271 1.176768 3.18904128 Aquarana catesbeiana 8400 Chordata Chordata 151 1.85e-44   NR PIO28092.1 8400 g15632 i0 83.1 0.985239852398524 89 15 98.5 0 271 5 46 134 PIO28092.1 hypothetical protein AB205_0067730 [Aquarana catesbeiana] diamond 267 151 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Aquarana Aquarana catesbeiana
31791481 31791481 PRJNA772154_P_NODE_18077_length_252_cov_0.871508_g17892_i0 PRJNA772154 18077 252 0.871508 2.19620016 Cricetulus griseus 10029 Chordata Chordata 57.4 3.04e-7   NR ERE67393.1 10029 g17892 i0 84 0.595238095238095 25 4 29.8 0 178 252 1557 1581 ERE67393.1 cytosolic carboxypeptidase-like protein 5 [Cricetulus griseus] diamond 150 57.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Cricetulus Cricetulus griseus
32487901 32487901 PRJNA772154_P_NODE_12299_length_317_cov_1.598361_g12114_i0 PRJNA772154 12299 317 1.598361 5.06680437 Myodes glareolus 447135 Chordata Chordata 48.9 6.16e-4   NR KAK7805727.1 447135 g12114 i0 43.1 0.615141955835962 65 36 61.5 1 232 38 437 500 KAK7805727.1 hypothetical protein U0070_010948, partial [Myodes glareolus] diamond 195 48.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Myodes Myodes glareolus
32551325 32551325 PRJNA772154_P_NODE_7219_length_448_cov_0.768000_g7034_i0 PRJNA772154 7219 448 0.768 3.44064 Ictidomys tridecemlineatus 43179 Chordata Chordata 50.1 7e-4   NR KAG3262610.1 43179 g7034 i0 76.7 0.930803571428571 30 7 20.1 0 50 139 242 271 KAG3262610.1 DRG1-like [Ictidomys tridecemlineatus] diamond 417 50.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Sciuridae Ictidomys Ictidomys tridecemlineatus
32771403 32771403 PRJNA772154_P_NODE_15320_length_277_cov_1.147059_g15135_i0 PRJNA772154 15320 277 1.147059 3.17735343 Rattus norvegicus 10116 Chordata Chordata 93.2 2.12e-22   NR EDL77384.1 10116 g15135 i0 89.6 0.51985559566787 48 5 52 0 1 144 28 75 EDL77384.1 similar to RIKEN cDNA 1300017J02, isoform CRA_a [Rattus norvegicus] diamond 144 93.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;