contig_metadata
1 row where analysis = "diamond", bioproject = "PRJNA772154" and tax_clade = "Apusozoa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32424505 | 32424505 | PRJNA772154_P_NODE_22319_length_243_cov_0.917647_g22134_i0 | PRJNA772154 | 22319 | 243 | 0.917647 | 2.22988221 | Thecamonas trahens ATCC 5 | 529818 | Root_unresolved | Root_unresolved | 57 | 3.47e-7 | NR | XP_013759109.1 | 461836 | g22134 | i0 | 47.6 | 0.777777777777778 | 63 | 28 | 77.8 | 1 | 53 | 241 | 26 | 83 | XP_013759109.1 uncharacterized protein AMSG_04326, partial [Thecamonas trahens ATCC 50062] | diamond | 189 | 57 | 1 | Eukaryota | Apusozoa | Apusomonadida | Apusomonadidae | Thecamonas | Thecamonas trahens |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;