RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA771359" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA771359 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32171533 32171533 PRJNA771359_S_NODE_1878_length_243_cov_2.053398_g1795_i0 PRJNA771359 1878 243 2.053398 4.98975714 Kummerowia striata picorna-like virus 2739852 Viruses Viruses 162 4.46e-44   NR QKK82977.1 2739852 g1795 i0 100 0.987654320987654 80 0 98.8 0 241 2 417 496 QKK82977.1 hypothetical protein 1 [Kummerowia striata picorna-like virus] diamond 240 162 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Kummerowia striata picorna-like virus
32897283 32897283 PRJNA771359_S_NODE_3980_length_169_cov_1.454545_g3897_i0 PRJNA771359 3980 169 1.454545 2.45818105 Kummerowia striata picorna-like virus 2739852 Viruses Viruses 104 1.97e-24   NR QKK82977.1 2739852 g3897 i0 92.7 0.976331360946746 55 4 97.6 0 3 167 581 635 QKK82977.1 hypothetical protein 1 [Kummerowia striata picorna-like virus] diamond 165 104 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Kummerowia striata picorna-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;